Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 SALL4P5-201ENST00000419001 1760 ntBASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 AK2P2-201ENST00000439142 405 ntBASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 AC105021.1-202ENST00000570572 669 ntBASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 AC120114.3-201ENST00000611923 658 ntBASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
RAB3IPQ96QF0 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 FAM90A11P-201ENST00000518378 2218 ntBASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 AC004623.1-201ENST00000624592 2127 ntBASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 KRT8P12-202ENST00000472924 1397 ntBASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 AC026150.2-201ENST00000564693 1156 ntBASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 AC009955.4-201ENST00000597192 544 ntBASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 AL021155.1-201ENST00000438808 2637 ntBASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 AL928654.5-201ENST00000624831 2501 ntBASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
RAB3IPQ96QF0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms