Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 RN7SKP175-201ENST00000408472 289 ntBASIC13.74□□□□□ -0.21
COL21A1Q96P44 HLA-V-201ENST00000429037 534 ntBASIC13.74□□□□□ -0.21
COL21A1Q96P44 CSF2RBP1-201ENST00000447905 391 ntBASIC13.74□□□□□ -0.21
COL21A1Q96P44 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 MIR6074-201ENST00000612054 107 ntBASIC13.74□□□□□ -0.21
COL21A1Q96P44 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.74□□□□□ -0.21
COL21A1Q96P44 AC020910.5-201ENST00000623668 1865 ntBASIC13.74□□□□□ -0.21
COL21A1Q96P44 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
COL21A1Q96P44 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL21A1Q96P44 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 AC004945.1-201ENST00000416738 983 ntBASIC13.73□□□□□ -0.21
COL21A1Q96P44 AC099336.1-201ENST00000417053 1171 ntBASIC13.73□□□□□ -0.21
COL21A1Q96P44 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 YBX1P6-201ENST00000442962 1002 ntBASIC13.73□□□□□ -0.21
COL21A1Q96P44 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 AC119751.2-201ENST00000504529 210 ntBASIC13.73□□□□□ -0.21
COL21A1Q96P44 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL21A1Q96P44 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.73□□□□□ -0.21
COL21A1Q96P44 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms