Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPRD1AQ96P16 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 TSPY25P-201ENST00000429463 745 ntBASIC14.88□□□□□ -0.03
RPRD1AQ96P16 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 AC090386.2-201ENST00000623010 1039 ntBASIC14.88□□□□□ -0.03
RPRD1AQ96P16 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 HSPA8P5-201ENST00000456928 2069 ntBASIC14.88□□□□□ -0.03
RPRD1AQ96P16 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPRD1AQ96P16 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPRD1AQ96P16 AC007191.1-201ENST00000623179 2995 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms