Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH3Q96II8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH3Q96II8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 RNVU1-8-201ENST00000364272 125 ntBASIC15.55■□□□□ 0.08
LRCH3Q96II8 OR10N1P-201ENST00000392758 869 ntBASIC15.55■□□□□ 0.08
LRCH3Q96II8 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 HMGA1P2-201ENST00000430198 324 ntBASIC15.55■□□□□ 0.08
LRCH3Q96II8 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 ALG1L15P-201ENST00000482834 794 ntBASIC15.55■□□□□ 0.08
LRCH3Q96II8 RN7SL147P-201ENST00000487345 298 ntBASIC15.55■□□□□ 0.08
LRCH3Q96II8 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 ACY3-202ENST00000529256 933 ntTSL 3 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 MYL6-215ENST00000549566 685 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 AC003686.1-201ENST00000550956 1034 ntBASIC15.55■□□□□ 0.08
LRCH3Q96II8 DERL2-206ENST00000572834 589 ntTSL 3 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 RN7SL665P-201ENST00000578793 300 ntBASIC15.55■□□□□ 0.08
LRCH3Q96II8 NAT9-219ENST00000582524 573 ntTSL 4 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LRCH3Q96II8 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH3Q96II8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH3Q96II8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH3Q96II8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH3Q96II8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH3Q96II8 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH3Q96II8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH3Q96II8 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH3Q96II8 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH3Q96II8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH3Q96II8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH3Q96II8 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 RN7SL564P-201ENST00000496309 250 ntBASIC15.54■□□□□ 0.08
LRCH3Q96II8 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 KRT18P37-201ENST00000520711 1282 ntBASIC15.54■□□□□ 0.08
LRCH3Q96II8 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH3Q96II8 AL109954.1-202ENST00000564051 2148 ntBASIC15.54■□□□□ 0.08
LRCH3Q96II8 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH3Q96II8 AL591424.3-201ENST00000614278 872 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms