Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.63□□□□□ -0.07
CHMP6Q96FZ7 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 LINC00567-201ENST00000569854 3409 ntBASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 AL445250.1-201ENST00000641671 2259 ntBASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 TLE1P1-201ENST00000422965 589 ntBASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 HLA-V-204ENST00000476601 1289 ntBASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 SORD2P-201ENST00000558556 1069 ntBASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 TEX28P1-201ENST00000613479 1221 ntBASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 TEX28P2-201ENST00000617764 1221 ntBASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 AC107375.1-201ENST00000564464 2231 ntBASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 AC073869.1-201ENST00000415574 2762 ntBASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 AC010970.1-201ENST00000445125 1848 ntBASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CHMP6Q96FZ7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 MIR943-201ENST00000401286 94 ntBASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 TREML5P-201ENST00000421694 576 ntBASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 AC007969.1-201ENST00000433675 447 ntBASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 AL353779.1-201ENST00000434793 351 ntBASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 AC139530.3-201ENST00000620344 690 ntBASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 AL928654.5-201ENST00000624831 2501 ntBASIC14.61□□□□□ -0.07
CHMP6Q96FZ7 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms