Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 AP001331.1-201ENST00000413008 1015 ntBASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 AL078624.1-201ENST00000604004 547 ntBASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 HDGF-202ENST00000368206 960 ntTSL 5 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 GYG1-209ENST00000483267 801 ntTSL 2 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 AC090616.6-202ENST00000583601 1088 ntBASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 AF186996.6-201ENST00000485294 149 ntBASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 BX510359.7-201ENST00000619819 630 ntBASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 AC011477.7-201ENST00000617163 1440 ntBASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 AC103592.1-201ENST00000394513 664 ntBASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 ASS1P1-201ENST00000402854 1237 ntBASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms