Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 FAM58BP-201ENST00000439056 645 ntBASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 Z97180.1-201ENST00000445173 988 ntBASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 UPF3AP2-201ENST00000457924 1132 ntBASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 MIR3619-201ENST00000579667 83 ntBASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 AC005324.6-201ENST00000587972 613 ntBASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 AC026740.1-201ENST00000607068 791 ntBASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 AP001505.2-201ENST00000616815 443 ntBASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 AL136295.7-201ENST00000619226 1200 ntBASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 AC068587.8-201ENST00000641239 219 ntBASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.37□□□□□ -0.43
CLDND2Q8NHS1 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 AC138969.2-201ENST00000532739 9932 ntBASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 AL133466.1-201ENST00000447582 150 ntBASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 AC245884.6-201ENST00000515672 1067 ntBASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 RN7SL774P-201ENST00000577467 290 ntBASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 AC132192.2-201ENST00000596206 1147 ntBASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 AC008825.2-201ENST00000603374 718 ntBASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 AC090164.2-201ENST00000611487 516 ntBASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 CU633904.3-201ENST00000624042 1029 ntBASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 AC100757.4-201ENST00000626934 759 ntBASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms