Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 AC138761.1-201ENST00000584393 385 ntBASIC13.65□□□□□ -0.22
LPCAT4Q643R3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 AC007967.4-201ENST00000614700 386 ntBASIC13.65□□□□□ -0.22
LPCAT4Q643R3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 ZNF259P1-201ENST00000407656 1365 ntBASIC13.65□□□□□ -0.22
LPCAT4Q643R3 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 DNM1P41-201ENST00000623634 3350 ntBASIC13.65□□□□□ -0.23
LPCAT4Q643R3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
LPCAT4Q643R3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 FAM90A11P-201ENST00000518378 2218 ntBASIC13.64□□□□□ -0.23
LPCAT4Q643R3 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 AC139712.1-201ENST00000378256 1875 ntBASIC13.64□□□□□ -0.23
LPCAT4Q643R3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 AC023274.1-201ENST00000418278 595 ntBASIC13.64□□□□□ -0.23
LPCAT4Q643R3 AL080243.2-201ENST00000418783 582 ntBASIC13.64□□□□□ -0.23
LPCAT4Q643R3 TLE1P1-201ENST00000422965 589 ntBASIC13.64□□□□□ -0.23
LPCAT4Q643R3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 ACTG1P14-201ENST00000446382 1122 ntBASIC13.64□□□□□ -0.23
LPCAT4Q643R3 KRT18P3-201ENST00000451602 1288 ntBASIC13.64□□□□□ -0.23
LPCAT4Q643R3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 AC120114.3-201ENST00000611923 658 ntBASIC13.64□□□□□ -0.23
LPCAT4Q643R3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LPCAT4Q643R3 TUBB3P1-201ENST00000405796 1332 ntBASIC13.64□□□□□ -0.23
LPCAT4Q643R3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 LINC00638-201ENST00000555578 2518 ntBASIC13.63□□□□□ -0.23
LPCAT4Q643R3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LPCAT4Q643R3 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms