Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RAE1P78406 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
RAE1P78406 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RAE1P78406 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.66□□□□□ -0.22
RAE1P78406 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.66□□□□□ -0.22
RAE1P78406 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.66□□□□□ -0.22
RAE1P78406 KRT223P-202ENST00000449164 1292 ntBASIC13.66□□□□□ -0.22
RAE1P78406 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.66□□□□□ -0.22
RAE1P78406 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RAE1P78406 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.66□□□□□ -0.22
RAE1P78406 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.66□□□□□ -0.22
RAE1P78406 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.66□□□□□ -0.22
RAE1P78406 AL512310.5-201ENST00000551999 515 ntBASIC13.66□□□□□ -0.22
RAE1P78406 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
RAE1P78406 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.66□□□□□ -0.22
RAE1P78406 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.66□□□□□ -0.22
RAE1P78406 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.66□□□□□ -0.22
RAE1P78406 AC133552.6-201ENST00000613406 534 ntBASIC13.66□□□□□ -0.22
RAE1P78406 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.66□□□□□ -0.22
RAE1P78406 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RAE1P78406 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 FAM90A7P-201ENST00000382628 1395 ntBASIC13.66□□□□□ -0.22
RAE1P78406 FAM90A23P-201ENST00000400136 1395 ntBASIC13.66□□□□□ -0.22
RAE1P78406 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RAE1P78406 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
RAE1P78406 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RAE1P78406 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
RAE1P78406 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RAE1P78406 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAE1P78406 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.65□□□□□ -0.22
RAE1P78406 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.65□□□□□ -0.22
RAE1P78406 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RAE1P78406 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
RAE1P78406 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RAE1P78406 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.65□□□□□ -0.22
RAE1P78406 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.65□□□□□ -0.22
RAE1P78406 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.65□□□□□ -0.22
RAE1P78406 AC018629.1-201ENST00000623381 1736 ntBASIC13.65□□□□□ -0.22
RAE1P78406 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.65□□□□□ -0.22
RAE1P78406 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.65□□□□□ -0.22
RAE1P78406 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RAE1P78406 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.65□□□□□ -0.22
RAE1P78406 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.65□□□□□ -0.22
RAE1P78406 AC092580.1-201ENST00000433998 658 ntBASIC13.65□□□□□ -0.22
RAE1P78406 MTX1P1-201ENST00000440904 838 ntBASIC13.65□□□□□ -0.22
RAE1P78406 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
RAE1P78406 RNMTL1P1-201ENST00000454103 560 ntBASIC13.65□□□□□ -0.22
RAE1P78406 RPL18P13-201ENST00000478088 569 ntBASIC13.65□□□□□ -0.22
RAE1P78406 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.65□□□□□ -0.22
RAE1P78406 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.65□□□□□ -0.22
RAE1P78406 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.65□□□□□ -0.22
RAE1P78406 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.65□□□□□ -0.22
RAE1P78406 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.65□□□□□ -0.22
RAE1P78406 AC010328.2-201ENST00000597698 1111 ntBASIC13.65□□□□□ -0.22
RAE1P78406 AL096828.3-201ENST00000615354 462 ntBASIC13.65□□□□□ -0.22
RAE1P78406 AL591471.1-201ENST00000621855 229 ntBASIC13.65□□□□□ -0.22
RAE1P78406 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.65□□□□□ -0.22
RAE1P78406 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RAE1P78406 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.65□□□□□ -0.22
RAE1P78406 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAE1P78406 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RAE1P78406 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.65□□□□□ -0.22
RAE1P78406 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms