Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
UBA52P62987 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.6□□□□□ -0.39
UBA52P62987 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
UBA52P62987 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.6□□□□□ -0.39
UBA52P62987 AC023794.5-201ENST00000564380 2157 ntBASIC12.6□□□□□ -0.39
UBA52P62987 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
UBA52P62987 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.6□□□□□ -0.39
UBA52P62987 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.6□□□□□ -0.39
UBA52P62987 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.6□□□□□ -0.39
UBA52P62987 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
UBA52P62987 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
UBA52P62987 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.6□□□□□ -0.39
UBA52P62987 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.6□□□□□ -0.39
UBA52P62987 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
UBA52P62987 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
UBA52P62987 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.6□□□□□ -0.39
UBA52P62987 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.6□□□□□ -0.39
UBA52P62987 SLED1-202ENST00000512051 380 ntBASIC12.6□□□□□ -0.39
UBA52P62987 AC022447.6-201ENST00000515522 438 ntBASIC12.6□□□□□ -0.39
UBA52P62987 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.6□□□□□ -0.39
UBA52P62987 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.6□□□□□ -0.39
UBA52P62987 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.6□□□□□ -0.39
UBA52P62987 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.6□□□□□ -0.39
UBA52P62987 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.6□□□□□ -0.39
UBA52P62987 AC079316.1-201ENST00000548397 411 ntBASIC12.6□□□□□ -0.39
UBA52P62987 AP000845.1-201ENST00000581677 2131 ntBASIC12.6□□□□□ -0.39
UBA52P62987 AC103810.3-201ENST00000583567 96 ntBASIC12.6□□□□□ -0.39
UBA52P62987 AC244093.1-201ENST00000610837 814 ntBASIC12.6□□□□□ -0.39
UBA52P62987 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
UBA52P62987 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.6□□□□□ -0.39
UBA52P62987 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.6□□□□□ -0.39
UBA52P62987 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.6□□□□□ -0.39
UBA52P62987 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.6□□□□□ -0.39
UBA52P62987 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBA52P62987 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
UBA52P62987 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.59□□□□□ -0.39
UBA52P62987 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
UBA52P62987 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
UBA52P62987 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 INE2-201ENST00000630399 1874 ntBASIC12.59□□□□□ -0.39
UBA52P62987 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.59□□□□□ -0.39
UBA52P62987 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
UBA52P62987 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
UBA52P62987 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
UBA52P62987 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
UBA52P62987 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.59□□□□□ -0.39
UBA52P62987 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.59□□□□□ -0.39
UBA52P62987 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBA52P62987 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
UBA52P62987 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.59□□□□□ -0.39
UBA52P62987 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms