Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.99□□□□□ -0.33
VBP1P61758 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
VBP1P61758 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
VBP1P61758 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
VBP1P61758 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
VBP1P61758 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.99□□□□□ -0.33
VBP1P61758 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 DNM1P41-201ENST00000623634 3350 ntBASIC12.99□□□□□ -0.33
VBP1P61758 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
VBP1P61758 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
VBP1P61758 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.99□□□□□ -0.33
VBP1P61758 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 ABCD1P2-201ENST00000429313 1601 ntBASIC12.99□□□□□ -0.33
VBP1P61758 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
VBP1P61758 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.98□□□□□ -0.33
VBP1P61758 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.98□□□□□ -0.33
VBP1P61758 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC12.98□□□□□ -0.33
VBP1P61758 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.98□□□□□ -0.33
VBP1P61758 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 AC007967.2-201ENST00000432613 625 ntBASIC12.98□□□□□ -0.33
VBP1P61758 AC007969.1-201ENST00000433675 447 ntBASIC12.98□□□□□ -0.33
VBP1P61758 EMBP1-201ENST00000458200 901 ntBASIC12.98□□□□□ -0.33
VBP1P61758 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.98□□□□□ -0.33
VBP1P61758 AC069335.1-201ENST00000489972 472 ntBASIC12.98□□□□□ -0.33
VBP1P61758 UNC93B7-201ENST00000509439 705 ntBASIC12.98□□□□□ -0.33
VBP1P61758 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.98□□□□□ -0.33
VBP1P61758 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.98□□□□□ -0.33
VBP1P61758 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.98□□□□□ -0.33
VBP1P61758 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
VBP1P61758 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.98□□□□□ -0.33
VBP1P61758 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.98□□□□□ -0.33
VBP1P61758 AC092865.6-201ENST00000642101 219 ntBASIC12.98□□□□□ -0.33
VBP1P61758 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
VBP1P61758 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.98□□□□□ -0.33
VBP1P61758 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
VBP1P61758 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.98□□□□□ -0.33
VBP1P61758 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
VBP1P61758 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
VBP1P61758 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VBP1P61758 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 AC003102.2-201ENST00000589195 1469 ntBASIC12.97□□□□□ -0.33
VBP1P61758 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.97□□□□□ -0.33
VBP1P61758 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 FAM90A11P-201ENST00000518378 2218 ntBASIC12.97□□□□□ -0.33
VBP1P61758 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.97□□□□□ -0.33
VBP1P61758 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.97□□□□□ -0.33
VBP1P61758 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.97□□□□□ -0.33
VBP1P61758 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
VBP1P61758 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
VBP1P61758 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VBP1P61758 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VBP1P61758 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms