Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.88□□□□□ -0.51
SPCS3P61009 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SPCS3P61009 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SPCS3P61009 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SPCS3P61009 AC090643.2-201ENST00000623442 2029 ntBASIC11.87□□□□□ -0.51
SPCS3P61009 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 AL138725.1-201ENST00000407347 1314 ntBASIC11.87□□□□□ -0.51
SPCS3P61009 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC11.87□□□□□ -0.51
SPCS3P61009 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.87□□□□□ -0.51
SPCS3P61009 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.87□□□□□ -0.51
SPCS3P61009 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.87□□□□□ -0.51
SPCS3P61009 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.87□□□□□ -0.51
SPCS3P61009 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SPCS3P61009 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SPCS3P61009 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.87□□□□□ -0.51
SPCS3P61009 EIF3FP3-201ENST00000434851 1086 ntBASIC11.87□□□□□ -0.51
SPCS3P61009 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
SPCS3P61009 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.87□□□□□ -0.51
SPCS3P61009 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.87□□□□□ -0.51
SPCS3P61009 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.87□□□□□ -0.51
SPCS3P61009 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
SPCS3P61009 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SPCS3P61009 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
SPCS3P61009 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.87□□□□□ -0.51
SPCS3P61009 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SPCS3P61009 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.87□□□□□ -0.51
SPCS3P61009 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
SPCS3P61009 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.87□□□□□ -0.51
SPCS3P61009 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SPCS3P61009 AC023794.5-201ENST00000564380 2157 ntBASIC11.86□□□□□ -0.51
SPCS3P61009 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
SPCS3P61009 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.86□□□□□ -0.51
SPCS3P61009 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.86□□□□□ -0.51
SPCS3P61009 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SPCS3P61009 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SPCS3P61009 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
SPCS3P61009 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 METTL26-204ENST00000397665 558 ntTSL 2 BASIC11.86□□□□□ -0.51
SPCS3P61009 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC11.86□□□□□ -0.51
SPCS3P61009 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
SPCS3P61009 SOCS2P1-201ENST00000417727 557 ntBASIC11.86□□□□□ -0.51
SPCS3P61009 AL442647.2-201ENST00000429864 857 ntBASIC11.86□□□□□ -0.51
SPCS3P61009 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC11.86□□□□□ -0.51
SPCS3P61009 GCOM2-201ENST00000509133 1104 ntBASIC11.86□□□□□ -0.51
SPCS3P61009 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.86□□□□□ -0.51
SPCS3P61009 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC11.86□□□□□ -0.51
SPCS3P61009 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.86□□□□□ -0.51
SPCS3P61009 AC138761.1-201ENST00000584393 385 ntBASIC11.86□□□□□ -0.51
SPCS3P61009 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.86□□□□□ -0.51
SPCS3P61009 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.86□□□□□ -0.51
SPCS3P61009 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.86□□□□□ -0.51
SPCS3P61009 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.86□□□□□ -0.51
SPCS3P61009 AP005019.2-201ENST00000615104 511 ntBASIC11.86□□□□□ -0.51
SPCS3P61009 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC11.86□□□□□ -0.51
SPCS3P61009 AL390754.1-201ENST00000619088 582 ntBASIC11.86□□□□□ -0.51
SPCS3P61009 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.86□□□□□ -0.51
SPCS3P61009 AC093028.1-201ENST00000622998 982 ntBASIC11.86□□□□□ -0.51
SPCS3P61009 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms