Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.28□□□□□ -0.28
CDC42P60953 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 AL445209.1-201ENST00000607269 3491 ntBASIC13.28□□□□□ -0.28
CDC42P60953 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CDC42P60953 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CDC42P60953 OR2I1P-208ENST00000641137 4948 ntBASIC13.28□□□□□ -0.28
CDC42P60953 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
CDC42P60953 AC134915.1-201ENST00000426461 574 ntBASIC13.28□□□□□ -0.28
CDC42P60953 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.28□□□□□ -0.28
CDC42P60953 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.28□□□□□ -0.28
CDC42P60953 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.28□□□□□ -0.28
CDC42P60953 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.28□□□□□ -0.28
CDC42P60953 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
CDC42P60953 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.28□□□□□ -0.28
CDC42P60953 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CDC42P60953 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 AL158211.3-201ENST00000607385 239 ntBASIC13.28□□□□□ -0.28
CDC42P60953 AC134684.3-201ENST00000641758 218 ntBASIC13.28□□□□□ -0.28
CDC42P60953 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
CDC42P60953 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.28□□□□□ -0.28
CDC42P60953 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.28□□□□□ -0.28
CDC42P60953 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CDC42P60953 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.28□□□□□ -0.28
CDC42P60953 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.28□□□□□ -0.28
CDC42P60953 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CDC42P60953 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CDC42P60953 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CDC42P60953 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.27□□□□□ -0.28
CDC42P60953 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CDC42P60953 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CDC42P60953 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CDC42P60953 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.28
CDC42P60953 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CDC42P60953 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.27□□□□□ -0.28
CDC42P60953 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.27□□□□□ -0.28
CDC42P60953 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDC42P60953 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CDC42P60953 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.28
CDC42P60953 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.27□□□□□ -0.29
CDC42P60953 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CDC42P60953 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.27□□□□□ -0.29
CDC42P60953 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CDC42P60953 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.27□□□□□ -0.29
CDC42P60953 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.27□□□□□ -0.29
CDC42P60953 FO681548.1-201ENST00000455617 1132 ntBASIC13.27□□□□□ -0.29
CDC42P60953 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CDC42P60953 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.27□□□□□ -0.29
CDC42P60953 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.27□□□□□ -0.29
CDC42P60953 AC109322.1-201ENST00000524499 1264 ntBASIC13.27□□□□□ -0.29
CDC42P60953 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.27□□□□□ -0.29
CDC42P60953 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.27□□□□□ -0.29
CDC42P60953 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
CDC42P60953 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.27□□□□□ -0.29
CDC42P60953 BRI3BPP1-201ENST00000594224 787 ntBASIC13.27□□□□□ -0.29
CDC42P60953 AL590560.3-201ENST00000623350 461 ntBASIC13.27□□□□□ -0.29
CDC42P60953 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.27□□□□□ -0.29
CDC42P60953 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CDC42P60953 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.27□□□□□ -0.29
CDC42P60953 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms