Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MIR3677-201ENST00000578964 60 ntBASIC12.9□□□□□ -0.34
GFRA1P56159 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.9□□□□□ -0.34
GFRA1P56159 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
GFRA1P56159 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
GFRA1P56159 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
GFRA1P56159 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
GFRA1P56159 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GFRA1P56159 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GFRA1P56159 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
GFRA1P56159 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
GFRA1P56159 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GFRA1P56159 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
GFRA1P56159 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
GFRA1P56159 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GFRA1P56159 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
GFRA1P56159 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
GFRA1P56159 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
GFRA1P56159 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
GFRA1P56159 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
GFRA1P56159 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
GFRA1P56159 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.89□□□□□ -0.35
GFRA1P56159 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 AC015656.1-201ENST00000624209 3578 ntBASIC12.89□□□□□ -0.35
GFRA1P56159 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.89□□□□□ -0.35
GFRA1P56159 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
GFRA1P56159 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GFRA1P56159 KRT17P5-201ENST00000332088 839 ntBASIC12.89□□□□□ -0.35
GFRA1P56159 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.89□□□□□ -0.35
GFRA1P56159 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.89□□□□□ -0.35
GFRA1P56159 HCG24-202ENST00000414398 717 ntTSL 3 BASIC12.89□□□□□ -0.35
GFRA1P56159 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.89□□□□□ -0.35
GFRA1P56159 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.89□□□□□ -0.35
GFRA1P56159 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.89□□□□□ -0.35
GFRA1P56159 DUTP3-201ENST00000450025 415 ntBASIC12.89□□□□□ -0.35
GFRA1P56159 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.89□□□□□ -0.35
GFRA1P56159 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC12.89□□□□□ -0.35
GFRA1P56159 AL512310.5-201ENST00000551999 515 ntBASIC12.89□□□□□ -0.35
GFRA1P56159 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.89□□□□□ -0.35
GFRA1P56159 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
GFRA1P56159 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.89□□□□□ -0.35
GFRA1P56159 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.89□□□□□ -0.35
GFRA1P56159 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.89□□□□□ -0.35
GFRA1P56159 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.89□□□□□ -0.35
GFRA1P56159 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
GFRA1P56159 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 AC007952.5-201ENST00000572818 1486 ntBASIC12.89□□□□□ -0.35
GFRA1P56159 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.89□□□□□ -0.35
GFRA1P56159 AC020910.6-201ENST00000623084 1459 ntBASIC12.89□□□□□ -0.35
GFRA1P56159 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
GFRA1P56159 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
GFRA1P56159 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.89□□□□□ -0.35
GFRA1P56159 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.89□□□□□ -0.35
GFRA1P56159 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GFRA1P56159 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
GFRA1P56159 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.88□□□□□ -0.35
GFRA1P56159 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.88□□□□□ -0.35
GFRA1P56159 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.88□□□□□ -0.35
GFRA1P56159 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
GFRA1P56159 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
GFRA1P56159 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.88□□□□□ -0.35
GFRA1P56159 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.88□□□□□ -0.35
GFRA1P56159 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 MIR557-201ENST00000385239 98 ntBASIC12.88□□□□□ -0.35
GFRA1P56159 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
GFRA1P56159 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 OR8T1P-201ENST00000421347 918 ntBASIC12.88□□□□□ -0.35
GFRA1P56159 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms