Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.61□□□□□ -0.07
LIMK2P53671 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
LIMK2P53671 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.61□□□□□ -0.07
LIMK2P53671 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.61□□□□□ -0.07
LIMK2P53671 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.61□□□□□ -0.07
LIMK2P53671 AC004898.1-201ENST00000451057 766 ntBASIC14.61□□□□□ -0.07
LIMK2P53671 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.61□□□□□ -0.07
LIMK2P53671 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.61□□□□□ -0.07
LIMK2P53671 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.61□□□□□ -0.07
LIMK2P53671 AC027237.1-201ENST00000560942 655 ntBASIC14.61□□□□□ -0.07
LIMK2P53671 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.61□□□□□ -0.07
LIMK2P53671 AC111170.3-201ENST00000624282 2464 ntBASIC14.61□□□□□ -0.07
LIMK2P53671 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.61□□□□□ -0.07
LIMK2P53671 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
LIMK2P53671 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LIMK2P53671 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LIMK2P53671 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.61□□□□□ -0.07
LIMK2P53671 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK2P53671 AL157996.1-201ENST00000624684 2299 ntBASIC14.61□□□□□ -0.07
LIMK2P53671 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LIMK2P53671 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.6□□□□□ -0.07
LIMK2P53671 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LIMK2P53671 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 AC105206.1-202ENST00000314927 2368 ntBASIC14.6□□□□□ -0.07
LIMK2P53671 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.6□□□□□ -0.07
LIMK2P53671 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
LIMK2P53671 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
LIMK2P53671 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.6□□□□□ -0.07
LIMK2P53671 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LIMK2P53671 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LIMK2P53671 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.6□□□□□ -0.07
LIMK2P53671 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 AC079178.1-201ENST00000420915 656 ntBASIC14.6□□□□□ -0.07
LIMK2P53671 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.6□□□□□ -0.07
LIMK2P53671 COX5BP1-201ENST00000507622 393 ntBASIC14.6□□□□□ -0.07
LIMK2P53671 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
LIMK2P53671 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 AL096828.3-201ENST00000615354 462 ntBASIC14.6□□□□□ -0.07
LIMK2P53671 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.6□□□□□ -0.07
LIMK2P53671 AC244452.3-201ENST00000636814 210 ntBASIC14.6□□□□□ -0.07
LIMK2P53671 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LIMK2P53671 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LIMK2P53671 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 AL023775.1-201ENST00000454907 1746 ntBASIC14.6□□□□□ -0.07
LIMK2P53671 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.6□□□□□ -0.07
LIMK2P53671 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.6□□□□□ -0.07
LIMK2P53671 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
LIMK2P53671 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK2P53671 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
LIMK2P53671 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.59□□□□□ -0.07
LIMK2P53671 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.59□□□□□ -0.07
LIMK2P53671 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK2P53671 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms