Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 AL022328.1-201ENST00000610050 478 ntBASIC12.93□□□□□ -0.34
SRP9P49458 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.93□□□□□ -0.34
SRP9P49458 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SRP9P49458 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.93□□□□□ -0.34
SRP9P49458 IGHV3-72-202ENST00000621503 303 ntBASIC12.93□□□□□ -0.34
SRP9P49458 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.93□□□□□ -0.34
SRP9P49458 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
SRP9P49458 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.93□□□□□ -0.34
SRP9P49458 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.93□□□□□ -0.34
SRP9P49458 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.93□□□□□ -0.34
SRP9P49458 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.93□□□□□ -0.34
SRP9P49458 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.93□□□□□ -0.34
SRP9P49458 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.92□□□□□ -0.34
SRP9P49458 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.92□□□□□ -0.34
SRP9P49458 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.92□□□□□ -0.34
SRP9P49458 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.92□□□□□ -0.34
SRP9P49458 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.92□□□□□ -0.34
SRP9P49458 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SRP9P49458 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.92□□□□□ -0.34
SRP9P49458 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SRP9P49458 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 AC005229.1-201ENST00000392885 409 ntBASIC12.92□□□□□ -0.34
SRP9P49458 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
SRP9P49458 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.92□□□□□ -0.34
SRP9P49458 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SRP9P49458 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.92□□□□□ -0.34
SRP9P49458 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.92□□□□□ -0.34
SRP9P49458 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SRP9P49458 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.92□□□□□ -0.34
SRP9P49458 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.92□□□□□ -0.34
SRP9P49458 AC233724.13-201ENST00000598383 410 ntBASIC12.92□□□□□ -0.34
SRP9P49458 AL035252.4-201ENST00000624174 288 ntBASIC12.92□□□□□ -0.34
SRP9P49458 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.92□□□□□ -0.34
SRP9P49458 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SRP9P49458 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SRP9P49458 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SRP9P49458 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.92□□□□□ -0.34
SRP9P49458 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SRP9P49458 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.92□□□□□ -0.34
SRP9P49458 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.92□□□□□ -0.34
SRP9P49458 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SRP9P49458 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SRP9P49458 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.91□□□□□ -0.34
SRP9P49458 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.91□□□□□ -0.34
SRP9P49458 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.91□□□□□ -0.34
SRP9P49458 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.91□□□□□ -0.34
SRP9P49458 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.91□□□□□ -0.34
SRP9P49458 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.91□□□□□ -0.34
SRP9P49458 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.91□□□□□ -0.34
SRP9P49458 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
SRP9P49458 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.91□□□□□ -0.34
SRP9P49458 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.91□□□□□ -0.34
SRP9P49458 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
SRP9P49458 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SRP9P49458 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.91□□□□□ -0.34
SRP9P49458 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.91□□□□□ -0.34
SRP9P49458 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.91□□□□□ -0.34
SRP9P49458 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.91□□□□□ -0.34
SRP9P49458 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.91□□□□□ -0.34
SRP9P49458 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.91□□□□□ -0.34
SRP9P49458 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.91□□□□□ -0.34
SRP9P49458 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.91□□□□□ -0.34
SRP9P49458 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.91□□□□□ -0.34
SRP9P49458 SLC25A47P1-201ENST00000531577 414 ntBASIC12.91□□□□□ -0.34
SRP9P49458 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.91□□□□□ -0.34
SRP9P49458 BTNL10-201ENST00000595971 695 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms