Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.91□□□□□ -0.18
CCKBRP32239 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCKBRP32239 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCKBRP32239 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCKBRP32239 AC139712.1-201ENST00000378256 1875 ntBASIC13.91□□□□□ -0.18
CCKBRP32239 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCKBRP32239 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCKBRP32239 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.91□□□□□ -0.18
CCKBRP32239 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.9□□□□□ -0.18
CCKBRP32239 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CCKBRP32239 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CCKBRP32239 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CCKBRP32239 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CCKBRP32239 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
CCKBRP32239 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
CCKBRP32239 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.9□□□□□ -0.18
CCKBRP32239 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 AL355334.1-201ENST00000417713 215 ntBASIC13.9□□□□□ -0.18
CCKBRP32239 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.9□□□□□ -0.18
CCKBRP32239 FTH1P22-201ENST00000456305 520 ntBASIC13.9□□□□□ -0.18
CCKBRP32239 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.9□□□□□ -0.18
CCKBRP32239 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.9□□□□□ -0.18
CCKBRP32239 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
CCKBRP32239 RPL17P45-201ENST00000586289 509 ntBASIC13.9□□□□□ -0.18
CCKBRP32239 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.9□□□□□ -0.18
CCKBRP32239 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.9□□□□□ -0.18
CCKBRP32239 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.9□□□□□ -0.18
CCKBRP32239 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CCKBRP32239 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CCKBRP32239 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CCKBRP32239 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.9□□□□□ -0.18
CCKBRP32239 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.9□□□□□ -0.18
CCKBRP32239 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.9□□□□□ -0.18
CCKBRP32239 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.9□□□□□ -0.18
CCKBRP32239 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCKBRP32239 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CCKBRP32239 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
CCKBRP32239 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CCKBRP32239 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.19
CCKBRP32239 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CCKBRP32239 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CCKBRP32239 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CCKBRP32239 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CCKBRP32239 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 AC007686.3-201ENST00000619017 3487 ntBASIC13.89□□□□□ -0.19
CCKBRP32239 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.89□□□□□ -0.19
CCKBRP32239 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CCKBRP32239 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CCKBRP32239 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CCKBRP32239 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.89□□□□□ -0.19
CCKBRP32239 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.89□□□□□ -0.19
CCKBRP32239 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.89□□□□□ -0.19
CCKBRP32239 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.89□□□□□ -0.19
CCKBRP32239 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.89□□□□□ -0.19
CCKBRP32239 ST13P19-201ENST00000442505 1124 ntBASIC13.89□□□□□ -0.19
CCKBRP32239 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.89□□□□□ -0.19
CCKBRP32239 AC124068.2-201ENST00000569473 1109 ntBASIC13.89□□□□□ -0.19
CCKBRP32239 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.89□□□□□ -0.19
CCKBRP32239 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.89□□□□□ -0.19
CCKBRP32239 HLA-C-210ENST00000640219 976 ntBASIC13.89□□□□□ -0.19
CCKBRP32239 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.89□□□□□ -0.19
CCKBRP32239 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCKBRP32239 MARK2P16-201ENST00000605714 1723 ntBASIC13.89□□□□□ -0.19
CCKBRP32239 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms