Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SLC6A4P31645 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
SLC6A4P31645 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
SLC6A4P31645 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SLC6A4P31645 FAM90A2P-201ENST00000511144 1395 ntBASIC14.76□□□□□ -0.05
SLC6A4P31645 FAM90A25P-201ENST00000528404 1395 ntBASIC14.76□□□□□ -0.05
SLC6A4P31645 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC6A4P31645 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 KRT17P5-201ENST00000332088 839 ntBASIC14.76□□□□□ -0.05
SLC6A4P31645 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.76□□□□□ -0.05
SLC6A4P31645 RPL8P2-201ENST00000430538 502 ntBASIC14.76□□□□□ -0.05
SLC6A4P31645 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC6A4P31645 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SLC6A4P31645 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC6A4P31645 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.76□□□□□ -0.05
SLC6A4P31645 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC6A4P31645 AC079328.1-201ENST00000560358 952 ntBASIC14.76□□□□□ -0.05
SLC6A4P31645 AC016629.1-201ENST00000596579 586 ntBASIC14.76□□□□□ -0.05
SLC6A4P31645 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC6A4P31645 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SLC6A4P31645 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC6A4P31645 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC6A4P31645 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SLC6A4P31645 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SLC6A4P31645 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC6A4P31645 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC6A4P31645 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC6A4P31645 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SLC6A4P31645 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A4P31645 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC6A4P31645 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 KRT8P31-201ENST00000504812 1408 ntBASIC14.75□□□□□ -0.05
SLC6A4P31645 LINC01815-202ENST00000641468 1409 ntBASIC14.75□□□□□ -0.05
SLC6A4P31645 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
SLC6A4P31645 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC6A4P31645 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SLC6A4P31645 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC6A4P31645 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC6A4P31645 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
SLC6A4P31645 LINC00115-201ENST00000473798 1317 ntBASIC14.75□□□□□ -0.05
SLC6A4P31645 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SLC6A4P31645 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SLC6A4P31645 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC6A4P31645 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC6A4P31645 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC6A4P31645 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC6A4P31645 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC6A4P31645 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC6A4P31645 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC6A4P31645 EEF1DP6-201ENST00000449232 372 ntBASIC14.75□□□□□ -0.05
SLC6A4P31645 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC6A4P31645 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC6A4P31645 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SLC6A4P31645 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
SLC6A4P31645 KRT8P1-201ENST00000557533 1207 ntBASIC14.75□□□□□ -0.05
SLC6A4P31645 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC6A4P31645 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC6A4P31645 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SLC6A4P31645 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A4P31645 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC6A4P31645 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms