Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.15□□□□□ -0.46
LMO1P25800 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
LMO1P25800 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.15□□□□□ -0.46
LMO1P25800 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LMO1P25800 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LMO1P25800 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.15□□□□□ -0.46
LMO1P25800 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.15□□□□□ -0.46
LMO1P25800 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.15□□□□□ -0.46
LMO1P25800 E2F3P2-201ENST00000447755 1422 ntBASIC12.15□□□□□ -0.46
LMO1P25800 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LMO1P25800 USP17L6P-201ENST00000382470 1197 ntBASIC12.15□□□□□ -0.46
LMO1P25800 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.15□□□□□ -0.46
LMO1P25800 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
LMO1P25800 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
LMO1P25800 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.15□□□□□ -0.46
LMO1P25800 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
LMO1P25800 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LMO1P25800 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 RAB43P1-201ENST00000561790 589 ntBASIC12.15□□□□□ -0.46
LMO1P25800 DUX4L45-201ENST00000566406 1057 ntBASIC12.15□□□□□ -0.46
LMO1P25800 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.15□□□□□ -0.46
LMO1P25800 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
LMO1P25800 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LMO1P25800 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO1P25800 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
LMO1P25800 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
LMO1P25800 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
LMO1P25800 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
LMO1P25800 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LMO1P25800 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
LMO1P25800 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.14□□□□□ -0.47
LMO1P25800 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
LMO1P25800 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.14□□□□□ -0.47
LMO1P25800 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.14□□□□□ -0.47
LMO1P25800 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.14□□□□□ -0.47
LMO1P25800 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.14□□□□□ -0.47
LMO1P25800 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LMO1P25800 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
LMO1P25800 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 AC244394.1-201ENST00000435000 1665 ntBASIC12.14□□□□□ -0.47
LMO1P25800 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
LMO1P25800 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.14□□□□□ -0.47
LMO1P25800 AC079776.1-201ENST00000401540 1152 ntBASIC12.14□□□□□ -0.47
LMO1P25800 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LMO1P25800 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.14□□□□□ -0.47
LMO1P25800 U91328.1-201ENST00000437528 223 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms