Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 NCLP1-201ENST00000445357 1963 ntBASIC12.32□□□□□ -0.44
VAMP1P23763 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.32□□□□□ -0.44
VAMP1P23763 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.32□□□□□ -0.44
VAMP1P23763 CETN4P-206ENST00000642099 2168 ntBASIC12.32□□□□□ -0.44
VAMP1P23763 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.32□□□□□ -0.44
VAMP1P23763 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAMP1P23763 YY2-201ENST00000429584 2741 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
VAMP1P23763 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 ZNF259P1-201ENST00000407656 1365 ntBASIC12.31□□□□□ -0.44
VAMP1P23763 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.31□□□□□ -0.44
VAMP1P23763 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.31□□□□□ -0.44
VAMP1P23763 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.31□□□□□ -0.44
VAMP1P23763 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 PCDHA6-201ENST00000378126 3267 ntBASIC12.31□□□□□ -0.44
VAMP1P23763 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.31□□□□□ -0.44
VAMP1P23763 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.31□□□□□ -0.44
VAMP1P23763 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.31□□□□□ -0.44
VAMP1P23763 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 AL591424.1-201ENST00000442569 1213 ntBASIC12.31□□□□□ -0.44
VAMP1P23763 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC12.31□□□□□ -0.44
VAMP1P23763 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.31□□□□□ -0.44
VAMP1P23763 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.31□□□□□ -0.44
VAMP1P23763 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.31□□□□□ -0.44
VAMP1P23763 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.31□□□□□ -0.44
VAMP1P23763 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.31□□□□□ -0.44
VAMP1P23763 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.31□□□□□ -0.44
VAMP1P23763 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.31□□□□□ -0.44
VAMP1P23763 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC12.31□□□□□ -0.44
VAMP1P23763 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
VAMP1P23763 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.31□□□□□ -0.44
VAMP1P23763 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.31□□□□□ -0.44
VAMP1P23763 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.31□□□□□ -0.44
VAMP1P23763 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
VAMP1P23763 HLA-A-201ENST00000376802 1334 ntBASIC12.31□□□□□ -0.44
VAMP1P23763 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.31□□□□□ -0.44
VAMP1P23763 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
VAMP1P23763 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.31□□□□□ -0.44
VAMP1P23763 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.31□□□□□ -0.44
VAMP1P23763 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VAMP1P23763 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VAMP1P23763 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.3□□□□□ -0.44
VAMP1P23763 SALL4P5-201ENST00000419001 1760 ntBASIC12.3□□□□□ -0.44
VAMP1P23763 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VAMP1P23763 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VAMP1P23763 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VAMP1P23763 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
VAMP1P23763 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
VAMP1P23763 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
VAMP1P23763 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VAMP1P23763 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VAMP1P23763 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.3□□□□□ -0.44
VAMP1P23763 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms