Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CDH3P22223 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH3P22223 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH3P22223 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH3P22223 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH3P22223 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CDH3P22223 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CDH3P22223 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH3P22223 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDH3P22223 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDH3P22223 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH3P22223 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 GPAA1P2-201ENST00000417923 928 ntBASIC14.29□□□□□ -0.12
CDH3P22223 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH3P22223 KRT8P13-201ENST00000463294 1010 ntBASIC14.29□□□□□ -0.12
CDH3P22223 AC022494.1-201ENST00000466044 728 ntBASIC14.29□□□□□ -0.12
CDH3P22223 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.29□□□□□ -0.12
CDH3P22223 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CDH3P22223 AC100827.2-201ENST00000563214 1194 ntBASIC14.29□□□□□ -0.12
CDH3P22223 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH3P22223 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH3P22223 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CDH3P22223 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.28□□□□□ -0.12
CDH3P22223 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH3P22223 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH3P22223 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDH3P22223 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.28□□□□□ -0.12
CDH3P22223 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.28□□□□□ -0.12
CDH3P22223 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.28□□□□□ -0.12
CDH3P22223 AC004898.1-201ENST00000451057 766 ntBASIC14.28□□□□□ -0.12
CDH3P22223 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH3P22223 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDH3P22223 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.28□□□□□ -0.12
CDH3P22223 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CDH3P22223 AC005730.2-201ENST00000564549 1184 ntBASIC14.28□□□□□ -0.12
CDH3P22223 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 MIR3615-201ENST00000581999 87 ntBASIC14.28□□□□□ -0.12
CDH3P22223 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.28□□□□□ -0.12
CDH3P22223 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.28□□□□□ -0.12
CDH3P22223 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH3P22223 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.27□□□□□ -0.12
CDH3P22223 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH3P22223 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH3P22223 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH3P22223 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CDH3P22223 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.27□□□□□ -0.12
CDH3P22223 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH3P22223 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.27□□□□□ -0.12
CDH3P22223 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.27□□□□□ -0.12
CDH3P22223 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH3P22223 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CDH3P22223 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.27□□□□□ -0.12
CDH3P22223 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH3P22223 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CDH3P22223 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CDH3P22223 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CDH3P22223 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CDH3P22223 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDH3P22223 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms