Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 RN7SKP230-201ENST00000365642 335 ntBASIC12.75□□□□□ -0.37
ATF1P18846 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ATF1P18846 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.75□□□□□ -0.37
ATF1P18846 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.75□□□□□ -0.37
ATF1P18846 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.75□□□□□ -0.37
ATF1P18846 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.75□□□□□ -0.37
ATF1P18846 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 AC093433.1-201ENST00000458048 571 ntBASIC12.75□□□□□ -0.37
ATF1P18846 CYMP-203ENST00000474680 1263 ntBASIC12.75□□□□□ -0.37
ATF1P18846 ELK1P1-201ENST00000485699 580 ntBASIC12.75□□□□□ -0.37
ATF1P18846 AC022137.2-201ENST00000503482 481 ntBASIC12.75□□□□□ -0.37
ATF1P18846 GCOM2-201ENST00000509133 1104 ntBASIC12.75□□□□□ -0.37
ATF1P18846 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ATF1P18846 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.75□□□□□ -0.37
ATF1P18846 AC103988.2-201ENST00000561804 725 ntBASIC12.75□□□□□ -0.37
ATF1P18846 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.75□□□□□ -0.37
ATF1P18846 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.75□□□□□ -0.37
ATF1P18846 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.75□□□□□ -0.37
ATF1P18846 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.75□□□□□ -0.37
ATF1P18846 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.75□□□□□ -0.37
ATF1P18846 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ATF1P18846 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATF1P18846 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ATF1P18846 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.75□□□□□ -0.37
ATF1P18846 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.75□□□□□ -0.37
ATF1P18846 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ATF1P18846 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ATF1P18846 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ATF1P18846 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ATF1P18846 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.74□□□□□ -0.37
ATF1P18846 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.74□□□□□ -0.37
ATF1P18846 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ATF1P18846 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.74□□□□□ -0.37
ATF1P18846 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
ATF1P18846 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
ATF1P18846 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ATF1P18846 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.74□□□□□ -0.37
ATF1P18846 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.74□□□□□ -0.37
ATF1P18846 TSPY16P-201ENST00000449843 468 ntBASIC12.74□□□□□ -0.37
ATF1P18846 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
ATF1P18846 MESTP3-201ENST00000503460 968 ntBASIC12.74□□□□□ -0.37
ATF1P18846 AC009486.1-201ENST00000569860 813 ntBASIC12.74□□□□□ -0.37
ATF1P18846 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.74□□□□□ -0.37
ATF1P18846 AJ011932.1-201ENST00000621707 465 ntBASIC12.74□□□□□ -0.37
ATF1P18846 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
ATF1P18846 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.74□□□□□ -0.37
ATF1P18846 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.74□□□□□ -0.37
ATF1P18846 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.74□□□□□ -0.37
ATF1P18846 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.74□□□□□ -0.37
ATF1P18846 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ATF1P18846 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.74□□□□□ -0.37
ATF1P18846 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.73□□□□□ -0.37
ATF1P18846 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.73□□□□□ -0.37
ATF1P18846 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.73□□□□□ -0.37
ATF1P18846 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ATF1P18846 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.73□□□□□ -0.37
ATF1P18846 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ATF1P18846 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.73□□□□□ -0.37
ATF1P18846 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.73□□□□□ -0.37
ATF1P18846 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ATF1P18846 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ATF1P18846 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.73□□□□□ -0.37
ATF1P18846 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.73□□□□□ -0.37
ATF1P18846 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATF1P18846 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms