Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
VCLP18206 AC130686.1-201ENST00000622936 2466 ntBASIC14.63□□□□□ -0.07
VCLP18206 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 RN7SKP230-201ENST00000365642 335 ntBASIC14.63□□□□□ -0.07
VCLP18206 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VCLP18206 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VCLP18206 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.63□□□□□ -0.07
VCLP18206 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
VCLP18206 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.63□□□□□ -0.07
VCLP18206 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.63□□□□□ -0.07
VCLP18206 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.63□□□□□ -0.07
VCLP18206 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.63□□□□□ -0.07
VCLP18206 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.63□□□□□ -0.07
VCLP18206 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.63□□□□□ -0.07
VCLP18206 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.63□□□□□ -0.07
VCLP18206 AC091271.1-201ENST00000611877 1162 ntBASIC14.63□□□□□ -0.07
VCLP18206 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
VCLP18206 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.63□□□□□ -0.07
VCLP18206 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
VCLP18206 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.63□□□□□ -0.07
VCLP18206 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.63□□□□□ -0.07
VCLP18206 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.63□□□□□ -0.07
VCLP18206 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCLP18206 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.63□□□□□ -0.07
VCLP18206 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.63□□□□□ -0.07
VCLP18206 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.62□□□□□ -0.07
VCLP18206 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.62□□□□□ -0.07
VCLP18206 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.62□□□□□ -0.07
VCLP18206 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.62□□□□□ -0.07
VCLP18206 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.62□□□□□ -0.07
VCLP18206 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.62□□□□□ -0.07
VCLP18206 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.62□□□□□ -0.07
VCLP18206 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.62□□□□□ -0.07
VCLP18206 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
VCLP18206 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.62□□□□□ -0.07
VCLP18206 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
VCLP18206 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
VCLP18206 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.62□□□□□ -0.07
VCLP18206 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.62□□□□□ -0.07
VCLP18206 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.62□□□□□ -0.07
VCLP18206 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
VCLP18206 FAM86HP-204ENST00000513466 959 ntBASIC14.62□□□□□ -0.07
VCLP18206 AP003171.2-201ENST00000528208 925 ntBASIC14.62□□□□□ -0.07
VCLP18206 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.62□□□□□ -0.07
VCLP18206 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.62□□□□□ -0.07
VCLP18206 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
VCLP18206 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.62□□□□□ -0.07
VCLP18206 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
VCLP18206 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.62□□□□□ -0.07
VCLP18206 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.62□□□□□ -0.07
VCLP18206 AC008825.2-201ENST00000603374 718 ntBASIC14.62□□□□□ -0.07
VCLP18206 AL136301.1-201ENST00000615830 422 ntBASIC14.62□□□□□ -0.07
VCLP18206 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.62□□□□□ -0.07
VCLP18206 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
VCLP18206 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.62□□□□□ -0.07
VCLP18206 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
VCLP18206 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCLP18206 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms