Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.1□□□□□ -0.31
FREM3P0C091 HINT2P1-201ENST00000419438 481 ntBASIC13.1□□□□□ -0.31
FREM3P0C091 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.1□□□□□ -0.31
FREM3P0C091 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.1□□□□□ -0.31
FREM3P0C091 AL035414.1-201ENST00000451327 857 ntBASIC13.1□□□□□ -0.31
FREM3P0C091 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC13.1□□□□□ -0.31
FREM3P0C091 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.1□□□□□ -0.31
FREM3P0C091 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.1□□□□□ -0.31
FREM3P0C091 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
FREM3P0C091 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.1□□□□□ -0.31
FREM3P0C091 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.1□□□□□ -0.31
FREM3P0C091 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 MYADML-201ENST00000474610 2147 ntBASIC13.1□□□□□ -0.31
FREM3P0C091 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 GRK6P1-201ENST00000400595 1711 ntBASIC13.1□□□□□ -0.31
FREM3P0C091 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 AP002353.1-201ENST00000528257 1599 ntBASIC13.1□□□□□ -0.31
FREM3P0C091 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 AL596276.2-201ENST00000447525 331 ntBASIC13.1□□□□□ -0.31
FREM3P0C091 DUTP3-201ENST00000450025 415 ntBASIC13.1□□□□□ -0.31
FREM3P0C091 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.1□□□□□ -0.31
FREM3P0C091 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.1□□□□□ -0.31
FREM3P0C091 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.1□□□□□ -0.31
FREM3P0C091 PGAM1P5-201ENST00000548011 764 ntBASIC13.1□□□□□ -0.31
FREM3P0C091 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
FREM3P0C091 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.1□□□□□ -0.31
FREM3P0C091 AC138894.2-201ENST00000602838 371 ntBASIC13.1□□□□□ -0.31
FREM3P0C091 AC106872.11-201ENST00000605838 421 ntBASIC13.1□□□□□ -0.31
FREM3P0C091 MIR6720-201ENST00000611664 98 ntBASIC13.1□□□□□ -0.31
FREM3P0C091 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 KRT8P29-201ENST00000420409 1371 ntBASIC13.1□□□□□ -0.31
FREM3P0C091 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.1□□□□□ -0.31
FREM3P0C091 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.1□□□□□ -0.31
FREM3P0C091 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 AC010327.5-201ENST00000586923 3061 ntBASIC13.1□□□□□ -0.31
FREM3P0C091 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
FREM3P0C091 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
FREM3P0C091 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.1□□□□□ -0.31
FREM3P0C091 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
FREM3P0C091 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
FREM3P0C091 MYO15B-237ENST00000642007 4893 ntBASIC13.09□□□□□ -0.31
FREM3P0C091 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.09□□□□□ -0.31
FREM3P0C091 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.09□□□□□ -0.31
FREM3P0C091 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
FREM3P0C091 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
FREM3P0C091 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.09□□□□□ -0.31
FREM3P0C091 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.09□□□□□ -0.31
FREM3P0C091 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.09□□□□□ -0.31
FREM3P0C091 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.09□□□□□ -0.31
FREM3P0C091 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.09□□□□□ -0.31
FREM3P0C091 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
FREM3P0C091 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.09□□□□□ -0.31
FREM3P0C091 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
FREM3P0C091 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
FREM3P0C091 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
FREM3P0C091 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FREM3P0C091 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms