Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC18.41■□□□□ 0.54
COL5A2P05997 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC18.41■□□□□ 0.54
COL5A2P05997 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL5A2P05997 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COL5A2P05997 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.41■□□□□ 0.54
COL5A2P05997 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.41■□□□□ 0.54
COL5A2P05997 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
COL5A2P05997 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
COL5A2P05997 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL5A2P05997 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL5A2P05997 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COL5A2P05997 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL5A2P05997 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC18.41■□□□□ 0.54
COL5A2P05997 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.41■□□□□ 0.54
COL5A2P05997 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC18.4■□□□□ 0.54
COL5A2P05997 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
COL5A2P05997 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC18.4■□□□□ 0.54
COL5A2P05997 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COL5A2P05997 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC18.4■□□□□ 0.54
COL5A2P05997 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC18.4■□□□□ 0.54
COL5A2P05997 URB1-AS1-201ENST00000534991 831 ntBASIC18.4■□□□□ 0.54
COL5A2P05997 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC18.4■□□□□ 0.54
COL5A2P05997 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC18.4■□□□□ 0.54
COL5A2P05997 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 AC103702.1-201ENST00000548801 2630 ntBASIC18.4■□□□□ 0.54
COL5A2P05997 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
COL5A2P05997 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
COL5A2P05997 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.4■□□□□ 0.54
COL5A2P05997 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.4■□□□□ 0.54
COL5A2P05997 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.4■□□□□ 0.54
COL5A2P05997 HCG11-201ENST00000411553 5696 ntBASIC18.4■□□□□ 0.54
COL5A2P05997 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.4■□□□□ 0.54
COL5A2P05997 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
COL5A2P05997 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COL5A2P05997 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC18.4■□□□□ 0.54
COL5A2P05997 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL5A2P05997 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.39■□□□□ 0.54
COL5A2P05997 HDGF-202ENST00000368206 960 ntTSL 5 BASIC18.39■□□□□ 0.54
COL5A2P05997 AC041040.1-201ENST00000425197 460 ntBASIC18.39■□□□□ 0.54
COL5A2P05997 PSME2P2-201ENST00000453033 700 ntBASIC18.39■□□□□ 0.54
COL5A2P05997 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL5A2P05997 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC18.39■□□□□ 0.54
COL5A2P05997 RNA5SP420-201ENST00000516997 137 ntBASIC18.39■□□□□ 0.54
COL5A2P05997 SRPK2P-201ENST00000523408 1100 ntBASIC18.39■□□□□ 0.54
COL5A2P05997 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC18.39■□□□□ 0.54
COL5A2P05997 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL5A2P05997 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
COL5A2P05997 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL5A2P05997 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL5A2P05997 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.39■□□□□ 0.54
COL5A2P05997 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
COL5A2P05997 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL5A2P05997 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.39■□□□□ 0.53
COL5A2P05997 AL050341.2-201ENST00000567508 1541 ntBASIC18.39■□□□□ 0.53
COL5A2P05997 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC18.39■□□□□ 0.53
COL5A2P05997 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC18.39■□□□□ 0.53
COL5A2P05997 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL5A2P05997 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL5A2P05997 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL5A2P05997 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC18.39■□□□□ 0.53
COL5A2P05997 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
COL5A2P05997 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL5A2P05997 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL5A2P05997 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC18.39■□□□□ 0.53
COL5A2P05997 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.39■□□□□ 0.53
COL5A2P05997 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COL5A2P05997 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL5A2P05997 CCL19-202ENST00000378800 414 ntTSL 2 BASIC18.39■□□□□ 0.53
COL5A2P05997 MIR632-201ENST00000385193 94 ntBASIC18.39■□□□□ 0.53
COL5A2P05997 AC092910.2-201ENST00000491262 348 ntBASIC18.39■□□□□ 0.53
COL5A2P05997 AP003040.1-201ENST00000532044 1024 ntBASIC18.39■□□□□ 0.53
COL5A2P05997 PRR20FP-201ENST00000603320 180 ntBASIC18.39■□□□□ 0.53
COL5A2P05997 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC18.39■□□□□ 0.53
COL5A2P05997 MEP1AP1-201ENST00000636082 1097 ntBASIC18.39■□□□□ 0.53
COL5A2P05997 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC18.39■□□□□ 0.53
COL5A2P05997 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL5A2P05997 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.38■□□□□ 0.53
COL5A2P05997 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
COL5A2P05997 CICP14-201ENST00000629111 2732 ntBASIC18.38■□□□□ 0.53
COL5A2P05997 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms