Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA1P02708 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA1P02708 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA1P02708 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.54■□□□□ 0.08
CHRNA1P02708 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.54■□□□□ 0.08
CHRNA1P02708 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA1P02708 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA1P02708 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15.54■□□□□ 0.08
CHRNA1P02708 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.54■□□□□ 0.08
CHRNA1P02708 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CHRNA1P02708 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRNA1P02708 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA1P02708 GRPEL2P1-201ENST00000453145 339 ntBASIC15.54■□□□□ 0.08
CHRNA1P02708 CHCHD2P2-201ENST00000503744 321 ntBASIC15.54■□□□□ 0.08
CHRNA1P02708 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.54■□□□□ 0.08
CHRNA1P02708 AC093826.1-201ENST00000508655 993 ntBASIC15.54■□□□□ 0.08
CHRNA1P02708 IGHV1-12-201ENST00000518307 205 ntBASIC15.54■□□□□ 0.08
CHRNA1P02708 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRNA1P02708 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRNA1P02708 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.54■□□□□ 0.08
CHRNA1P02708 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.54■□□□□ 0.08
CHRNA1P02708 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRNA1P02708 MIR4472-1-201ENST00000584349 80 ntBASIC15.54■□□□□ 0.08
CHRNA1P02708 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC15.54■□□□□ 0.08
CHRNA1P02708 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA1P02708 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CHRNA1P02708 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CHRNA1P02708 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.54■□□□□ 0.08
CHRNA1P02708 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRNA1P02708 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA1P02708 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA1P02708 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRNA1P02708 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRNA1P02708 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA1P02708 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA1P02708 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA1P02708 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA1P02708 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRNA1P02708 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.53■□□□□ 0.08
CHRNA1P02708 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.53■□□□□ 0.08
CHRNA1P02708 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CHRNA1P02708 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 RPL13AP3-202ENST00000494676 1473 ntBASIC15.53■□□□□ 0.08
CHRNA1P02708 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CHRNA1P02708 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.53■□□□□ 0.08
CHRNA1P02708 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 AC019109.1-201ENST00000401725 1874 ntBASIC15.53■□□□□ 0.08
CHRNA1P02708 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.53■□□□□ 0.08
CHRNA1P02708 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC15.53■□□□□ 0.08
CHRNA1P02708 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CHRNA1P02708 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 BCAS2P2-201ENST00000425064 674 ntBASIC15.53■□□□□ 0.08
CHRNA1P02708 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.53■□□□□ 0.08
CHRNA1P02708 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.53■□□□□ 0.08
CHRNA1P02708 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.53■□□□□ 0.08
CHRNA1P02708 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.53■□□□□ 0.08
CHRNA1P02708 RN7SL23P-201ENST00000484055 275 ntBASIC15.53■□□□□ 0.08
CHRNA1P02708 RN7SL767P-201ENST00000493013 295 ntBASIC15.53■□□□□ 0.08
CHRNA1P02708 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.53■□□□□ 0.08
CHRNA1P02708 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC15.53■□□□□ 0.08
CHRNA1P02708 SNORD3B-1-201ENST00000577988 758 ntBASIC15.53■□□□□ 0.08
CHRNA1P02708 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.53■□□□□ 0.08
CHRNA1P02708 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.53■□□□□ 0.08
CHRNA1P02708 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.53■□□□□ 0.08
CHRNA1P02708 AC091769.1-201ENST00000619576 568 ntBASIC15.53■□□□□ 0.08
CHRNA1P02708 AC011471.3-201ENST00000623576 402 ntBASIC15.53■□□□□ 0.08
CHRNA1P02708 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.53■□□□□ 0.08
CHRNA1P02708 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.53■□□□□ 0.08
CHRNA1P02708 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.53■□□□□ 0.08
CHRNA1P02708 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CHRNA1P02708 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
CHRNA1P02708 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.53■□□□□ 0.08
CHRNA1P02708 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CHRNA1P02708 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.53■□□□□ 0.08
CHRNA1P02708 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRNA1P02708 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.52■□□□□ 0.08
CHRNA1P02708 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA1P02708 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.52■□□□□ 0.08
CHRNA1P02708 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA1P02708 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.52■□□□□ 0.08
CHRNA1P02708 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CHRNA1P02708 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms