Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC10.47□□□□□ -0.73
PAX4O43316 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PAX4O43316 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
PAX4O43316 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC10.47□□□□□ -0.73
PAX4O43316 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PAX4O43316 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PAX4O43316 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PAX4O43316 PDIA3P1-201ENST00000471856 1510 ntBASIC10.47□□□□□ -0.73
PAX4O43316 AC011840.2-201ENST00000563063 1520 ntBASIC10.47□□□□□ -0.73
PAX4O43316 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PAX4O43316 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PAX4O43316 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
PAX4O43316 AC004899.2-201ENST00000622993 3860 ntBASIC10.47□□□□□ -0.73
PAX4O43316 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC10.47□□□□□ -0.73
PAX4O43316 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PAX4O43316 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC10.47□□□□□ -0.73
PAX4O43316 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PAX4O43316 LINC01230-201ENST00000625222 3017 ntBASIC10.47□□□□□ -0.73
PAX4O43316 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
PAX4O43316 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PAX4O43316 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
PAX4O43316 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
PAX4O43316 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
PAX4O43316 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC10.46□□□□□ -0.73
PAX4O43316 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC10.46□□□□□ -0.73
PAX4O43316 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 USP31-203ENST00000567975 2142 ntTSL 2 BASIC10.46□□□□□ -0.73
PAX4O43316 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC10.46□□□□□ -0.73
PAX4O43316 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
PAX4O43316 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC10.46□□□□□ -0.73
PAX4O43316 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC10.46□□□□□ -0.73
PAX4O43316 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC10.46□□□□□ -0.73
PAX4O43316 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
PAX4O43316 MIR1202-201ENST00000408529 83 ntBASIC10.46□□□□□ -0.73
PAX4O43316 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC10.46□□□□□ -0.73
PAX4O43316 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
PAX4O43316 RPL7P3-201ENST00000441388 714 ntBASIC10.46□□□□□ -0.73
PAX4O43316 CDC23-208ENST00000505120 455 ntTSL 3 BASIC10.46□□□□□ -0.73
PAX4O43316 COX5BP1-201ENST00000507622 393 ntBASIC10.46□□□□□ -0.73
PAX4O43316 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC10.46□□□□□ -0.73
PAX4O43316 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC10.46□□□□□ -0.73
PAX4O43316 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC10.46□□□□□ -0.73
PAX4O43316 AC104989.1-201ENST00000519711 778 ntBASIC10.46□□□□□ -0.73
PAX4O43316 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC10.46□□□□□ -0.73
PAX4O43316 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
PAX4O43316 AC023310.1-201ENST00000554836 735 ntBASIC10.46□□□□□ -0.73
PAX4O43316 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC10.46□□□□□ -0.73
PAX4O43316 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC10.46□□□□□ -0.73
PAX4O43316 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
PAX4O43316 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC10.46□□□□□ -0.73
PAX4O43316 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC10.46□□□□□ -0.73
PAX4O43316 AC138696.2-201ENST00000607376 223 ntBASIC10.46□□□□□ -0.73
PAX4O43316 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC10.46□□□□□ -0.73
PAX4O43316 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC10.46□□□□□ -0.74
PAX4O43316 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
PAX4O43316 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PAX4O43316 MPI-203ENST00000535694 1523 ntTSL 2 BASIC10.46□□□□□ -0.74
PAX4O43316 AMT-204ENST00000427987 1646 ntTSL 5 BASIC10.46□□□□□ -0.74
PAX4O43316 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC10.46□□□□□ -0.74
PAX4O43316 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PAX4O43316 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC10.46□□□□□ -0.74
PAX4O43316 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PAX4O43316 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC10.46□□□□□ -0.74
PAX4O43316 AC113367.3-201ENST00000508316 1912 ntBASIC10.46□□□□□ -0.74
PAX4O43316 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
PAX4O43316 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC10.46□□□□□ -0.74
PAX4O43316 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
PAX4O43316 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
PAX4O43316 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PAX4O43316 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PAX4O43316 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC10.46□□□□□ -0.74
PAX4O43316 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
PAX4O43316 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
PAX4O43316 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC10.46□□□□□ -0.74
PAX4O43316 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
PAX4O43316 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
PAX4O43316 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PAX4O43316 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
PAX4O43316 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC10.46□□□□□ -0.74
PAX4O43316 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PAX4O43316 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PAX4O43316 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PAX4O43316 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
PAX4O43316 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms