Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN5O00501 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN5O00501 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 AC099063.4-201ENST00000641099 1602 ntBASIC15.19■□□□□ 0.02
CLDN5O00501 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 AC007274.2-201ENST00000421675 662 ntBASIC15.19■□□□□ 0.02
CLDN5O00501 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN5O00501 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN5O00501 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN5O00501 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.19■□□□□ 0.02
CLDN5O00501 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 AC242376.1-201ENST00000559033 726 ntBASIC15.19■□□□□ 0.02
CLDN5O00501 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN5O00501 AC093752.3-201ENST00000567343 901 ntBASIC15.19■□□□□ 0.02
CLDN5O00501 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN5O00501 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN5O00501 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CLDN5O00501 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CLDN5O00501 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 BRD7P5-201ENST00000299197 1822 ntBASIC15.19■□□□□ 0.02
CLDN5O00501 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CLDN5O00501 AC020910.6-201ENST00000623084 1459 ntBASIC15.19■□□□□ 0.02
CLDN5O00501 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 SNX18-202ENST00000343017 3140 ntBASIC15.19■□□□□ 0.02
CLDN5O00501 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CLDN5O00501 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CLDN5O00501 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN5O00501 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN5O00501 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN5O00501 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.18■□□□□ 0.02
CLDN5O00501 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN5O00501 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 AL009178.2-201ENST00000597278 2719 ntBASIC15.18■□□□□ 0.02
CLDN5O00501 LINC02486-201ENST00000604157 3000 ntBASIC15.18■□□□□ 0.02
CLDN5O00501 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 AC027601.5-201ENST00000624065 2482 ntBASIC15.18■□□□□ 0.02
CLDN5O00501 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN5O00501 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN5O00501 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CLDN5O00501 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN5O00501 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN5O00501 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN5O00501 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN5O00501 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN5O00501 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN5O00501 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CLDN5O00501 AL353637.1-201ENST00000451571 732 ntBASIC15.18■□□□□ 0.02
CLDN5O00501 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN5O00501 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLDN5O00501 AC026803.1-201ENST00000569130 274 ntBASIC15.18■□□□□ 0.02
CLDN5O00501 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN5O00501 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN5O00501 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN5O00501 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN5O00501 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CLDN5O00501 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN5O00501 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 AC015967.2-201ENST00000624092 234 ntBASIC15.18■□□□□ 0.02
CLDN5O00501 AC006435.4-201ENST00000625037 234 ntBASIC15.18■□□□□ 0.02
CLDN5O00501 AL356737.1-201ENST00000634391 234 ntBASIC15.18■□□□□ 0.02
CLDN5O00501 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN5O00501 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN5O00501 AC026748.1-201ENST00000624349 3251 ntBASIC15.18■□□□□ 0.02
CLDN5O00501 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN5O00501 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms