Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.72□□□□□ -0.21
UPK1AO00322 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
UPK1AO00322 AC023310.1-201ENST00000554836 735 ntBASIC13.72□□□□□ -0.21
UPK1AO00322 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK1AO00322 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK1AO00322 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.72□□□□□ -0.21
UPK1AO00322 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK1AO00322 AC027601.3-201ENST00000622907 509 ntBASIC13.72□□□□□ -0.21
UPK1AO00322 AC008687.7-202ENST00000637404 953 ntBASIC13.72□□□□□ -0.21
UPK1AO00322 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
UPK1AO00322 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
UPK1AO00322 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
UPK1AO00322 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
UPK1AO00322 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.72□□□□□ -0.21
UPK1AO00322 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
UPK1AO00322 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK1AO00322 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK1AO00322 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
UPK1AO00322 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
UPK1AO00322 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 ST20-AS1-201ENST00000560255 4223 ntBASIC13.72□□□□□ -0.21
UPK1AO00322 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.72□□□□□ -0.21
UPK1AO00322 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UPK1AO00322 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1AO00322 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1AO00322 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1AO00322 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1AO00322 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1AO00322 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1AO00322 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
UPK1AO00322 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
UPK1AO00322 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
UPK1AO00322 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1AO00322 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1AO00322 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
UPK1AO00322 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
UPK1AO00322 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1AO00322 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1AO00322 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1AO00322 MIR1909-201ENST00000411312 80 ntBASIC13.71□□□□□ -0.21
UPK1AO00322 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UPK1AO00322 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK1AO00322 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.71□□□□□ -0.21
UPK1AO00322 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.71□□□□□ -0.21
UPK1AO00322 AL035414.1-201ENST00000451327 857 ntBASIC13.71□□□□□ -0.21
UPK1AO00322 HOMER2P2-201ENST00000451621 847 ntBASIC13.71□□□□□ -0.21
UPK1AO00322 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.71□□□□□ -0.21
UPK1AO00322 SNX29P1-201ENST00000548357 1007 ntBASIC13.71□□□□□ -0.21
UPK1AO00322 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.71□□□□□ -0.21
UPK1AO00322 AC135782.3-201ENST00000562782 2105 ntBASIC13.71□□□□□ -0.21
UPK1AO00322 AP006547.1-201ENST00000563435 692 ntBASIC13.71□□□□□ -0.21
UPK1AO00322 AL136301.1-201ENST00000615830 422 ntBASIC13.71□□□□□ -0.21
UPK1AO00322 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.71□□□□□ -0.21
UPK1AO00322 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.71□□□□□ -0.21
UPK1AO00322 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.71□□□□□ -0.22
UPK1AO00322 AC009093.10-201ENST00000641956 1442 ntBASIC13.71□□□□□ -0.22
UPK1AO00322 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
UPK1AO00322 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
UPK1AO00322 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
UPK1AO00322 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
UPK1AO00322 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.71□□□□□ -0.22
UPK1AO00322 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.71□□□□□ -0.22
UPK1AO00322 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.71□□□□□ -0.22
UPK1AO00322 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK1AO00322 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK1AO00322 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.71□□□□□ -0.22
UPK1AO00322 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK1AO00322 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UPK1AO00322 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
UPK1AO00322 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
UPK1AO00322 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1AO00322 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1AO00322 SHC1P1-201ENST00000425230 1745 ntBASIC13.7□□□□□ -0.22
UPK1AO00322 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK1AO00322 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
UPK1AO00322 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
UPK1AO00322 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.7□□□□□ -0.22
UPK1AO00322 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.7□□□□□ -0.22
UPK1AO00322 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1AO00322 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1AO00322 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1AO00322 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK1AO00322 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1AO00322 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1AO00322 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1AO00322 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UPK1AO00322 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.7□□□□□ -0.22
UPK1AO00322 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms