Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC11□□□□□ -0.65
COLCA2A8K830 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
COLCA2A8K830 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 DGKZP1-201ENST00000378718 2776 ntBASIC11□□□□□ -0.65
COLCA2A8K830 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 AC025183.3-201ENST00000623526 1482 ntBASIC11□□□□□ -0.65
COLCA2A8K830 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 PMS2-201ENST00000265849 2855 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
COLCA2A8K830 MFAP4-201ENST00000299610 1873 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 MFAP4-203ENST00000497081 1876 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 HERC6-203ENST00000380265 3781 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
COLCA2A8K830 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11□□□□□ -0.65
COLCA2A8K830 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11□□□□□ -0.65
COLCA2A8K830 AL645929.1-201ENST00000420084 975 ntBASIC11□□□□□ -0.65
COLCA2A8K830 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC11□□□□□ -0.65
COLCA2A8K830 AC026271.2-201ENST00000428091 497 ntBASIC11□□□□□ -0.65
COLCA2A8K830 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC11□□□□□ -0.65
COLCA2A8K830 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11□□□□□ -0.65
COLCA2A8K830 KRT8P26-201ENST00000534154 1276 ntBASIC11□□□□□ -0.65
COLCA2A8K830 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
COLCA2A8K830 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11□□□□□ -0.65
COLCA2A8K830 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC11□□□□□ -0.65
COLCA2A8K830 AP001269.4-201ENST00000609611 512 ntBASIC11□□□□□ -0.65
COLCA2A8K830 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11□□□□□ -0.65
COLCA2A8K830 TBCB-214ENST00000629269 413 ntTSL 5 BASIC11□□□□□ -0.65
COLCA2A8K830 IRAK2-201ENST00000256458 3483 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11□□□□□ -0.65
COLCA2A8K830 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11□□□□□ -0.65
COLCA2A8K830 SALL4P6-201ENST00000429385 1691 ntBASIC11□□□□□ -0.65
COLCA2A8K830 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
COLCA2A8K830 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC11□□□□□ -0.65
COLCA2A8K830 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
COLCA2A8K830 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11□□□□□ -0.65
COLCA2A8K830 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
COLCA2A8K830 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC11□□□□□ -0.65
COLCA2A8K830 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
COLCA2A8K830 TADA2B-205ENST00000515646 3818 ntBASIC11□□□□□ -0.65
COLCA2A8K830 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11□□□□□ -0.65
COLCA2A8K830 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC11□□□□□ -0.65
COLCA2A8K830 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 SMAP1-203ENST00000370455 3333 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC10.99□□□□□ -0.65
COLCA2A8K830 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC10.99□□□□□ -0.65
COLCA2A8K830 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
COLCA2A8K830 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 POU2F2-201ENST00000342301 3730 ntTSL 5 BASIC10.99□□□□□ -0.65
COLCA2A8K830 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 SMARCAL1-201ENST00000357276 3271 ntAPPRIS P2 TSL 2 BASIC10.99□□□□□ -0.65
COLCA2A8K830 IFT22-211ENST00000621899 2272 ntTSL 2 BASIC10.99□□□□□ -0.65
COLCA2A8K830 AC015909.3-201ENST00000572855 1794 ntBASIC10.99□□□□□ -0.65
COLCA2A8K830 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC10.99□□□□□ -0.65
COLCA2A8K830 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
COLCA2A8K830 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
COLCA2A8K830 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.99□□□□□ -0.65
COLCA2A8K830 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC10.99□□□□□ -0.65
COLCA2A8K830 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC10.99□□□□□ -0.65
COLCA2A8K830 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.99□□□□□ -0.65
COLCA2A8K830 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC10.99□□□□□ -0.65
COLCA2A8K830 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC10.99□□□□□ -0.65
COLCA2A8K830 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms