Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
KNCNA6PVL3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
KNCNA6PVL3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC10.9□□□□□ -0.66
KNCNA6PVL3 AC079178.1-201ENST00000420915 656 ntBASIC10.9□□□□□ -0.66
KNCNA6PVL3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC10.9□□□□□ -0.66
KNCNA6PVL3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC10.9□□□□□ -0.66
KNCNA6PVL3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC10.9□□□□□ -0.66
KNCNA6PVL3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
KNCNA6PVL3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
KNCNA6PVL3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
KNCNA6PVL3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
KNCNA6PVL3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC10.9□□□□□ -0.66
KNCNA6PVL3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC10.9□□□□□ -0.66
KNCNA6PVL3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC10.9□□□□□ -0.66
KNCNA6PVL3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC10.9□□□□□ -0.66
KNCNA6PVL3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
KNCNA6PVL3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KNCNA6PVL3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
KNCNA6PVL3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KNCNA6PVL3 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KNCNA6PVL3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KNCNA6PVL3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
KNCNA6PVL3 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KNCNA6PVL3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC10.9□□□□□ -0.67
KNCNA6PVL3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
KNCNA6PVL3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
KNCNA6PVL3 AL590440.2-201ENST00000641973 1595 ntBASIC10.9□□□□□ -0.67
KNCNA6PVL3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC10.9□□□□□ -0.67
KNCNA6PVL3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
KNCNA6PVL3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC10.9□□□□□ -0.67
KNCNA6PVL3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
KNCNA6PVL3 AC027601.5-201ENST00000624065 2482 ntBASIC10.9□□□□□ -0.67
KNCNA6PVL3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC10.9□□□□□ -0.67
KNCNA6PVL3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
KNCNA6PVL3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
KNCNA6PVL3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 AL122018.1-201ENST00000446607 2310 ntBASIC10.89□□□□□ -0.67
KNCNA6PVL3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 AC010141.1-201ENST00000411585 623 ntBASIC10.89□□□□□ -0.67
KNCNA6PVL3 HNRNPA1P27-201ENST00000412087 955 ntBASIC10.89□□□□□ -0.67
KNCNA6PVL3 AL035414.1-201ENST00000451327 857 ntBASIC10.89□□□□□ -0.67
KNCNA6PVL3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 RPL13AP20-201ENST00000459725 609 ntBASIC10.89□□□□□ -0.67
KNCNA6PVL3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 AC100827.2-201ENST00000563214 1194 ntBASIC10.89□□□□□ -0.67
KNCNA6PVL3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 RN7SL560P-201ENST00000577943 264 ntBASIC10.89□□□□□ -0.67
KNCNA6PVL3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 AC244157.2-201ENST00000616239 1006 ntBASIC10.89□□□□□ -0.67
KNCNA6PVL3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
KNCNA6PVL3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
KNCNA6PVL3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
KNCNA6PVL3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
KNCNA6PVL3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms