Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 SCARNA21-201ENST00000517026 139 ntBASIC14.47□□□□□ -0.09
SPASTQ9UBP0 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 RN7SL574P-201ENST00000581512 297 ntBASIC14.47□□□□□ -0.09
SPASTQ9UBP0 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 MTHFR-210ENST00000641407 2387 ntBASIC14.47□□□□□ -0.09
SPASTQ9UBP0 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 FAM90A7P-201ENST00000382628 1395 ntBASIC14.47□□□□□ -0.09
SPASTQ9UBP0 FAM90A23P-201ENST00000400136 1395 ntBASIC14.47□□□□□ -0.09
SPASTQ9UBP0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPASTQ9UBP0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 DMBT1P1-203ENST00000636837 4628 ntBASIC14.46□□□□□ -0.09
SPASTQ9UBP0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 AC134698.3-201ENST00000523880 214 ntBASIC14.46□□□□□ -0.09
SPASTQ9UBP0 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 AL353726.2-201ENST00000623259 884 ntBASIC14.46□□□□□ -0.09
SPASTQ9UBP0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPASTQ9UBP0 AC018442.1-201ENST00000421439 2061 ntBASIC14.46□□□□□ -0.09
SPASTQ9UBP0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPASTQ9UBP0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPASTQ9UBP0 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SPASTQ9UBP0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SPASTQ9UBP0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPASTQ9UBP0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPASTQ9UBP0 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPASTQ9UBP0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SPASTQ9UBP0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SPASTQ9UBP0 AC140479.7-201ENST00000636301 2332 ntBASIC14.46□□□□□ -0.1
SPASTQ9UBP0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SPASTQ9UBP0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
SPASTQ9UBP0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms