Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 AC099063.4-201ENST00000641099 1602 ntBASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 AC140658.4-201ENST00000561990 352 ntBASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 MIR3677-201ENST00000578964 60 ntBASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 AC104506.1-201ENST00000609247 429 ntBASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 AC128714.1-201ENST00000637035 887 ntBASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 AC087386.2-201ENST00000623212 4637 ntBASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLCF1Q9UBD9 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 BANF1P3-201ENST00000412556 261 ntBASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 DUX4L50-201ENST00000455245 715 ntBASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 RN7SL277P-201ENST00000481521 288 ntBASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 AC019193.1-201ENST00000506678 823 ntBASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 AC093752.3-201ENST00000567343 901 ntBASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.84□□□□□ -0.35
CLCF1Q9UBD9 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms