Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC9.57□□□□□ -0.88
LINC00474Q9P2X8 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC00474Q9P2X8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC00474Q9P2X8 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC00474Q9P2X8 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC00474Q9P2X8 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC00474Q9P2X8 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC9.57□□□□□ -0.88
LINC00474Q9P2X8 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC00474Q9P2X8 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC00474Q9P2X8 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC00474Q9P2X8 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 FKBP4P6-201ENST00000457486 1332 ntBASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 AJ011931.1-201ENST00000618749 2492 ntBASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 POM121L4P-202ENST00000427789 1891 ntBASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 SNX21-203ENST00000372541 771 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 RPL7P3-201ENST00000441388 714 ntBASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 AL355994.2-201ENST00000447882 704 ntBASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 MIR6805-201ENST00000615055 62 ntBASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 LINC01230-201ENST00000625222 3017 ntBASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 GSN-215ENST00000545652 2428 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 AC023090.2-201ENST00000625182 2110 ntBASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 AC092135.3-201ENST00000624151 1846 ntBASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC00474Q9P2X8 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms