Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HMG20BQ9P0W2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 AC026320.2-201ENST00000434379 478 ntBASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 EEF1DP6-201ENST00000449232 372 ntBASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 AC021016.3-201ENST00000608367 477 ntBASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 AL591471.1-201ENST00000621855 229 ntBASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.53■□□□□ 0.4
HMG20BQ9P0W2 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 AC016397.2-201ENST00000624848 1985 ntBASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 BANF1P3-201ENST00000412556 261 ntBASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 RN7SL67P-201ENST00000492147 296 ntBASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 PRKXP1-201ENST00000561423 1122 ntBASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 LINC01783-202ENST00000614408 828 ntBASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 BX284668.2-205ENST00000619677 828 ntBASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMG20BQ9P0W2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMG20BQ9P0W2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.52■□□□□ 0.39
HMG20BQ9P0W2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
HMG20BQ9P0W2 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HMG20BQ9P0W2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.52■□□□□ 0.39
HMG20BQ9P0W2 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMG20BQ9P0W2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.52■□□□□ 0.39
HMG20BQ9P0W2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
HMG20BQ9P0W2 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMG20BQ9P0W2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms