Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
THUMPD1Q9NXG2 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.68□□□□□ -0.22
THUMPD1Q9NXG2 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.68□□□□□ -0.22
THUMPD1Q9NXG2 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 AGAP10P-201ENST00000454844 2418 ntBASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 MIR661-201ENST00000384842 89 ntBASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 DGCR5-201ENST00000399539 862 ntBASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 AC004945.1-201ENST00000416738 983 ntBASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 MIR4745-201ENST00000577608 62 ntBASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 AC104506.1-201ENST00000609247 429 ntBASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
THUMPD1Q9NXG2 AC020658.7-201ENST00000624274 2442 ntBASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 AL157996.1-201ENST00000624684 2299 ntBASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 USP17L6P-201ENST00000382470 1197 ntBASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 FAM8A4P-201ENST00000435433 1213 ntBASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 AL161932.2-201ENST00000435436 679 ntBASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 AC007389.4-201ENST00000454674 793 ntBASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 AP001889.1-201ENST00000525414 633 ntBASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 AC002472.3-201ENST00000640124 621 ntBASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms