Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11YQ9BZA8 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11YQ9BZA8 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11YQ9BZA8 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDH11YQ9BZA8 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCDH11YQ9BZA8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDH11YQ9BZA8 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDH11YQ9BZA8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
PCDH11YQ9BZA8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDH11YQ9BZA8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11YQ9BZA8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 SSR4-202ENST00000370085 526 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 GALP-202ENST00000440823 889 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 RBM4-207ENST00000506523 654 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 F11R-204ENST00000537746 1245 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 AC092862.1-201ENST00000541534 533 ntBASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 AC018695.6-201ENST00000614011 534 ntBASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 CICP14-201ENST00000629111 2732 ntBASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH11YQ9BZA8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH11YQ9BZA8 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH11YQ9BZA8 RN7SL832P-201ENST00000607781 1756 ntBASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 GEMIN8P4-201ENST00000380526 729 ntBASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 AC005777.1-201ENST00000588332 187 ntBASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 AL136982.5-201ENST00000605222 294 ntBASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 WARS-203ENST00000358655 2466 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH11YQ9BZA8 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 USP39-220ENST00000613444 2161 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms