Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL354877.1-201ENST00000424412 413 ntBASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 AC092580.1-201ENST00000433998 658 ntBASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 KRT17P8-201ENST00000540749 863 ntBASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 CR383656.12-201ENST00000549567 513 ntBASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 AC005225.4-201ENST00000557330 545 ntBASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 MIR4741-201ENST00000579822 90 ntBASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 AL358472.5-202ENST00000641448 1267 ntBASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO3Q9BXY4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
RSPO3Q9BXY4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO3Q9BXY4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
RSPO3Q9BXY4 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
RSPO3Q9BXY4 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO3Q9BXY4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
RSPO3Q9BXY4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.21□□□□□ -0.3
RSPO3Q9BXY4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO3Q9BXY4 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO3Q9BXY4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.21□□□□□ -0.3
RSPO3Q9BXY4 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.21□□□□□ -0.3
RSPO3Q9BXY4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO3Q9BXY4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO3Q9BXY4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO3Q9BXY4 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO3Q9BXY4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 KRT43P-201ENST00000434019 910 ntBASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 VDAC1P1-201ENST00000439229 848 ntBASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 KLF2P4-201ENST00000451959 1225 ntBASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 PGAM1P5-201ENST00000548011 764 ntBASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 AC005730.2-201ENST00000564549 1184 ntBASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 MIR4259-201ENST00000584466 101 ntBASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 AL591122.2-201ENST00000624125 1853 ntBASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 AC125807.2-201ENST00000513358 3514 ntBASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 AP002353.1-201ENST00000528257 1599 ntBASIC13.2□□□□□ -0.3
RSPO3Q9BXY4 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms