Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC133552.6-201ENST00000613406 534 ntBASIC14.26□□□□□ -0.13
NPAS2Q99743 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.26□□□□□ -0.13
NPAS2Q99743 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NPAS2Q99743 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.26□□□□□ -0.13
NPAS2Q99743 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.26□□□□□ -0.13
NPAS2Q99743 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.26□□□□□ -0.13
NPAS2Q99743 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.26□□□□□ -0.13
NPAS2Q99743 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.26□□□□□ -0.13
NPAS2Q99743 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.26□□□□□ -0.13
NPAS2Q99743 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NPAS2Q99743 Z82170.1-201ENST00000625081 3192 ntBASIC14.26□□□□□ -0.13
NPAS2Q99743 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.26□□□□□ -0.13
NPAS2Q99743 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.26□□□□□ -0.13
NPAS2Q99743 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 AL365181.3-201ENST00000605886 3222 ntBASIC14.25□□□□□ -0.13
NPAS2Q99743 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 AL157996.1-201ENST00000624684 2299 ntBASIC14.25□□□□□ -0.13
NPAS2Q99743 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.25□□□□□ -0.13
NPAS2Q99743 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NPAS2Q99743 AL645937.2-201ENST00000396808 931 ntBASIC14.25□□□□□ -0.13
NPAS2Q99743 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.25□□□□□ -0.13
NPAS2Q99743 KLF2P4-201ENST00000451959 1225 ntBASIC14.25□□□□□ -0.13
NPAS2Q99743 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.25□□□□□ -0.13
NPAS2Q99743 AC007551.1-201ENST00000457394 519 ntBASIC14.25□□□□□ -0.13
NPAS2Q99743 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.25□□□□□ -0.13
NPAS2Q99743 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.25□□□□□ -0.13
NPAS2Q99743 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.25□□□□□ -0.13
NPAS2Q99743 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.25□□□□□ -0.13
NPAS2Q99743 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.25□□□□□ -0.13
NPAS2Q99743 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.25□□□□□ -0.13
NPAS2Q99743 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.25□□□□□ -0.13
NPAS2Q99743 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.25□□□□□ -0.13
NPAS2Q99743 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.25□□□□□ -0.13
NPAS2Q99743 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NPAS2Q99743 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.25□□□□□ -0.13
NPAS2Q99743 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPAS2Q99743 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.25□□□□□ -0.13
NPAS2Q99743 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPAS2Q99743 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPAS2Q99743 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPAS2Q99743 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NPAS2Q99743 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPAS2Q99743 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NPAS2Q99743 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPAS2Q99743 AL136172.1-201ENST00000598590 1394 ntBASIC14.24□□□□□ -0.13
NPAS2Q99743 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NPAS2Q99743 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPAS2Q99743 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NPAS2Q99743 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NPAS2Q99743 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NPAS2Q99743 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPAS2Q99743 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
NPAS2Q99743 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.24□□□□□ -0.13
NPAS2Q99743 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.24□□□□□ -0.13
NPAS2Q99743 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPAS2Q99743 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPAS2Q99743 AC099336.1-201ENST00000417053 1171 ntBASIC14.24□□□□□ -0.13
NPAS2Q99743 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.24□□□□□ -0.13
NPAS2Q99743 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.24□□□□□ -0.13
NPAS2Q99743 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NPAS2Q99743 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.24□□□□□ -0.13
NPAS2Q99743 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.24□□□□□ -0.13
NPAS2Q99743 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.24□□□□□ -0.13
NPAS2Q99743 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.24□□□□□ -0.13
NPAS2Q99743 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.24□□□□□ -0.13
NPAS2Q99743 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.24□□□□□ -0.13
NPAS2Q99743 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
NPAS2Q99743 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NPAS2Q99743 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.24□□□□□ -0.13
NPAS2Q99743 AL033527.4-201ENST00000641026 673 ntBASIC14.24□□□□□ -0.13
NPAS2Q99743 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NPAS2Q99743 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.24□□□□□ -0.13
NPAS2Q99743 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPAS2Q99743 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NPAS2Q99743 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPAS2Q99743 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms