Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PKP4Q99569 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKP4Q99569 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKP4Q99569 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.1□□□□□ -0.15
PKP4Q99569 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
PKP4Q99569 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.1□□□□□ -0.15
PKP4Q99569 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.1□□□□□ -0.15
PKP4Q99569 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.1□□□□□ -0.15
PKP4Q99569 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKP4Q99569 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.1□□□□□ -0.15
PKP4Q99569 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.1□□□□□ -0.15
PKP4Q99569 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PKP4Q99569 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKP4Q99569 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKP4Q99569 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PKP4Q99569 AL022313.4-201ENST00000562756 2046 ntBASIC14.1□□□□□ -0.15
PKP4Q99569 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PKP4Q99569 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
PKP4Q99569 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PKP4Q99569 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PKP4Q99569 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
PKP4Q99569 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.1□□□□□ -0.15
PKP4Q99569 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PKP4Q99569 AC041040.2-201ENST00000622926 2899 ntBASIC14.09□□□□□ -0.15
PKP4Q99569 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
PKP4Q99569 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
PKP4Q99569 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.09□□□□□ -0.15
PKP4Q99569 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PKP4Q99569 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.09□□□□□ -0.15
PKP4Q99569 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.09□□□□□ -0.15
PKP4Q99569 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.09□□□□□ -0.15
PKP4Q99569 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.09□□□□□ -0.15
PKP4Q99569 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.09□□□□□ -0.15
PKP4Q99569 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.09□□□□□ -0.15
PKP4Q99569 AC104306.2-201ENST00000451877 341 ntBASIC14.09□□□□□ -0.15
PKP4Q99569 AC104073.2-201ENST00000453737 312 ntBASIC14.09□□□□□ -0.15
PKP4Q99569 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.09□□□□□ -0.15
PKP4Q99569 HLA-J-204ENST00000495278 958 ntBASIC14.09□□□□□ -0.15
PKP4Q99569 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.09□□□□□ -0.15
PKP4Q99569 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.09□□□□□ -0.15
PKP4Q99569 AC003686.1-201ENST00000550956 1034 ntBASIC14.09□□□□□ -0.15
PKP4Q99569 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.09□□□□□ -0.15
PKP4Q99569 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.09□□□□□ -0.15
PKP4Q99569 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.09□□□□□ -0.15
PKP4Q99569 AC124068.2-201ENST00000569473 1109 ntBASIC14.09□□□□□ -0.15
PKP4Q99569 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.09□□□□□ -0.15
PKP4Q99569 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.09□□□□□ -0.15
PKP4Q99569 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.09□□□□□ -0.15
PKP4Q99569 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.09□□□□□ -0.15
PKP4Q99569 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.09□□□□□ -0.15
PKP4Q99569 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.09□□□□□ -0.15
PKP4Q99569 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 TCAM1P-207ENST00000485295 1537 ntBASIC14.09□□□□□ -0.15
PKP4Q99569 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
PKP4Q99569 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.09□□□□□ -0.15
PKP4Q99569 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PKP4Q99569 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
PKP4Q99569 FAM90A7P-201ENST00000382628 1395 ntBASIC14.09□□□□□ -0.15
PKP4Q99569 FAM90A23P-201ENST00000400136 1395 ntBASIC14.09□□□□□ -0.15
PKP4Q99569 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
PKP4Q99569 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PKP4Q99569 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PKP4Q99569 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
PKP4Q99569 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PKP4Q99569 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PKP4Q99569 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PKP4Q99569 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PKP4Q99569 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PKP4Q99569 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PKP4Q99569 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PKP4Q99569 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
PKP4Q99569 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
PKP4Q99569 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PKP4Q99569 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PKP4Q99569 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PKP4Q99569 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PKP4Q99569 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
PKP4Q99569 ACTBP11-201ENST00000436287 1126 ntBASIC14.08□□□□□ -0.16
PKP4Q99569 AC108725.1-201ENST00000495472 409 ntBASIC14.08□□□□□ -0.16
PKP4Q99569 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.08□□□□□ -0.16
PKP4Q99569 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.08□□□□□ -0.16
PKP4Q99569 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PKP4Q99569 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PKP4Q99569 RN7SL163P-201ENST00000583100 276 ntBASIC14.08□□□□□ -0.16
PKP4Q99569 AC021016.3-201ENST00000608367 477 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 223.6 ms