Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 AL035414.1-201ENST00000451327 857 ntBASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 RPL13AP3-202ENST00000494676 1473 ntBASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 MIR611-201ENST00000384869 67 ntBASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 DNM1P48-201ENST00000419538 439 ntBASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 RN7SL524P-201ENST00000581152 300 ntBASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 MIR4459-201ENST00000581837 66 ntBASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 ESR1-214ENST00000638569 132 ntTSL 5 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 KRT18P62-201ENST00000446618 1287 ntBASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 AL132994.1-201ENST00000554098 400 ntBASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.98□□□□□ -0.49
CSMD1Q96PZ7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 AC068418.2-201ENST00000577309 3703 ntBASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 URAHP-205ENST00000610227 398 ntBASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 HNRNPA1P21-201ENST00000424115 961 ntBASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 TPT1P11-201ENST00000458482 498 ntBASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 RN7SL788P-201ENST00000460504 316 ntBASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 PRSS3P1-201ENST00000503996 742 ntBASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 EEF1GP8-201ENST00000506566 1154 ntBASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 OR52V1P-201ENST00000515557 898 ntBASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms