Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 AL590440.2-201ENST00000641973 1595 ntBASIC13.98□□□□□ -0.17
VPS33AQ96AX1 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 AC004945.1-201ENST00000416738 983 ntBASIC13.98□□□□□ -0.17
VPS33AQ96AX1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 SPTLC1P1-201ENST00000447199 261 ntBASIC13.98□□□□□ -0.17
VPS33AQ96AX1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
VPS33AQ96AX1 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 MESTP3-201ENST00000503460 968 ntBASIC13.97□□□□□ -0.17
VPS33AQ96AX1 AP001063.1-201ENST00000568332 529 ntBASIC13.97□□□□□ -0.17
VPS33AQ96AX1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 TMEM261P1-201ENST00000604899 340 ntBASIC13.97□□□□□ -0.17
VPS33AQ96AX1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 BX088702.1-201ENST00000610784 235 ntBASIC13.97□□□□□ -0.17
VPS33AQ96AX1 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 AC009093.2-202ENST00000620513 2079 ntBASIC13.97□□□□□ -0.17
VPS33AQ96AX1 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 NUTM2HP-201ENST00000442076 2498 ntBASIC13.97□□□□□ -0.17
VPS33AQ96AX1 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS33AQ96AX1 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms