Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
DDX1Q92499 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.37■□□□□ 0.05
DDX1Q92499 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
DDX1Q92499 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
DDX1Q92499 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
DDX1Q92499 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
DDX1Q92499 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.36■□□□□ 0.05
DDX1Q92499 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
DDX1Q92499 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 POM121L10P-201ENST00000436994 1285 ntBASIC15.36■□□□□ 0.05
DDX1Q92499 VDAC1P1-201ENST00000439229 848 ntBASIC15.36■□□□□ 0.05
DDX1Q92499 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.36■□□□□ 0.05
DDX1Q92499 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.36■□□□□ 0.05
DDX1Q92499 MIR4750-201ENST00000584564 56 ntBASIC15.36■□□□□ 0.05
DDX1Q92499 AC090386.2-201ENST00000623010 1039 ntBASIC15.36■□□□□ 0.05
DDX1Q92499 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
DDX1Q92499 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.36■□□□□ 0.05
DDX1Q92499 AC092978.1-202ENST00000637590 1327 ntBASIC15.36■□□□□ 0.05
DDX1Q92499 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
DDX1Q92499 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
DDX1Q92499 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
DDX1Q92499 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.35■□□□□ 0.05
DDX1Q92499 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.35■□□□□ 0.05
DDX1Q92499 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
DDX1Q92499 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.35■□□□□ 0.05
DDX1Q92499 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
DDX1Q92499 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
DDX1Q92499 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.35■□□□□ 0.05
DDX1Q92499 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.35■□□□□ 0.05
DDX1Q92499 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
DDX1Q92499 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.35■□□□□ 0.05
DDX1Q92499 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.35■□□□□ 0.05
DDX1Q92499 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 IMP3P2-201ENST00000489760 475 ntBASIC15.35■□□□□ 0.05
DDX1Q92499 AC022217.1-201ENST00000521069 738 ntBASIC15.35■□□□□ 0.05
DDX1Q92499 AC126915.1-201ENST00000522847 1038 ntBASIC15.35■□□□□ 0.05
DDX1Q92499 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.35■□□□□ 0.05
DDX1Q92499 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
DDX1Q92499 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.35■□□□□ 0.05
DDX1Q92499 AL096828.3-201ENST00000615354 462 ntBASIC15.35■□□□□ 0.05
DDX1Q92499 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.35■□□□□ 0.05
DDX1Q92499 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
DDX1Q92499 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
DDX1Q92499 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
DDX1Q92499 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.35■□□□□ 0.05
DDX1Q92499 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.35■□□□□ 0.05
DDX1Q92499 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.35■□□□□ 0.05
DDX1Q92499 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.35■□□□□ 0.05
DDX1Q92499 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
DDX1Q92499 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DDX1Q92499 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.34■□□□□ 0.05
DDX1Q92499 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms