Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IL1Q8TBN0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
RAB3IL1Q8TBN0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 AC004241.5-201ENST00000623870 2448 ntBASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 CR383656.2-201ENST00000548656 2254 ntBASIC14.52□□□□□ -0.09
RAB3IL1Q8TBN0 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3IL1Q8TBN0 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms