Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SMARCC2Q8TAQ2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SMARCC2Q8TAQ2 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCC2Q8TAQ2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCC2Q8TAQ2 AC130686.1-201ENST00000622936 2466 ntBASIC16.93■□□□□ 0.3
SMARCC2Q8TAQ2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SMARCC2Q8TAQ2 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCC2Q8TAQ2 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCC2Q8TAQ2 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.93■□□□□ 0.3
SMARCC2Q8TAQ2 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCC2Q8TAQ2 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCC2Q8TAQ2 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 AGAP10P-201ENST00000454844 2418 ntBASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 TUBB8P8-201ENST00000458717 1058 ntBASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCC2Q8TAQ2 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 AC022494.1-201ENST00000466044 728 ntBASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 SERPINA13P-202ENST00000478994 924 ntBASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 AL008718.2-201ENST00000609206 1313 ntBASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCC2Q8TAQ2 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 AL451050.2-201ENST00000606967 682 ntBASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.9■□□□□ 0.3
SMARCC2Q8TAQ2 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms