Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 AC136475.7-201ENST00000602949 592 ntBASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 AC020763.4-201ENST00000623414 4170 ntBASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 NRADDP-202ENST00000641269 1585 ntBASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL22A1Q8NFW1 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 HNRNPA1P3-201ENST00000440968 551 ntBASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 SNORA47-201ENST00000458862 138 ntBASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 AC104115.1-201ENST00000484005 623 ntBASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 RN7SL47P-201ENST00000488710 299 ntBASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 AL109954.3-201ENST00000615088 558 ntBASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 TUBB4AP1-201ENST00000450755 1325 ntBASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 AL109954.1-202ENST00000564051 2148 ntBASIC18.44■□□□□ 0.54
COL22A1Q8NFW1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 PPP1R2P10-201ENST00000393023 595 ntBASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 HNRNPABP1-201ENST00000406003 734 ntBASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 RN7SL646P-201ENST00000492969 297 ntBASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 AC127002.1-201ENST00000619123 455 ntBASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 GSN-209ENST00000449733 2702 ntTSL 2 BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC18.43■□□□□ 0.54
COL22A1Q8NFW1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 PPT1-215ENST00000641471 2368 ntBASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 AC090505.1-201ENST00000430515 1834 ntBASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 AC069421.1-201ENST00000447462 323 ntBASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 AC007279.1-201ENST00000448547 837 ntBASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 RN7SL677P-201ENST00000466970 319 ntBASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COL22A1Q8NFW1 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms