Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 AC069262.1-201ENST00000539058 672 ntBASIC12.58□□□□□ -0.4
BEST4Q8NFU0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 CLK3P2-201ENST00000427566 1453 ntBASIC12.58□□□□□ -0.4
BEST4Q8NFU0 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 MYADML-201ENST00000474610 2147 ntBASIC12.58□□□□□ -0.4
BEST4Q8NFU0 AC135782.3-201ENST00000562782 2105 ntBASIC12.58□□□□□ -0.4
BEST4Q8NFU0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 AC044860.1-202ENST00000559481 777 ntBASIC12.57□□□□□ -0.4
BEST4Q8NFU0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.57□□□□□ -0.4
BEST4Q8NFU0 AL158212.4-201ENST00000624062 1286 ntBASIC12.57□□□□□ -0.4
BEST4Q8NFU0 AC073592.8-201ENST00000624126 511 ntBASIC12.57□□□□□ -0.4
BEST4Q8NFU0 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 AL138799.1-201ENST00000448213 1675 ntBASIC12.57□□□□□ -0.4
BEST4Q8NFU0 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 AC011840.2-201ENST00000563063 1520 ntBASIC12.57□□□□□ -0.4
BEST4Q8NFU0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
BEST4Q8NFU0 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BEST4Q8NFU0 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms