Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 AC098934.1-203ENST00000442868 1262 ntBASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 AL133467.4-201ENST00000602953 725 ntBASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 AC138466.4-201ENST00000623965 852 ntBASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS3Q8IXF0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 AL591122.2-201ENST00000624125 1853 ntBASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 AC126755.1-201ENST00000525846 6405 ntBASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 BCAS2P2-201ENST00000425064 674 ntBASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 MIR4472-1-201ENST00000584349 80 ntBASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 AC006158.1-201ENST00000610661 249 ntBASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 FO393412.1-201ENST00000619841 382 ntBASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NPAS3Q8IXF0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms