Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 AL512384.1-201ENST00000406683 331 ntBASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 RN7SKP175-201ENST00000408472 289 ntBASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 HMGN1P19-201ENST00000436976 333 ntBASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 INE1-201ENST00000456273 945 ntBASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 BTNL10-201ENST00000595971 695 ntBASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 AC233724.13-201ENST00000598383 410 ntBASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 OR10B1P-201ENST00000601666 907 ntBASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 TCAM1P-207ENST00000485295 1537 ntBASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2AQ7L7L0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 TCAF1P1-201ENST00000414990 2232 ntBASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 KHSRPP1-201ENST00000427983 1768 ntBASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 DGCR9-201ENST00000609630 2415 ntBASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 CD8B2-202ENST00000417670 633 ntBASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 KRT43P-201ENST00000434019 910 ntBASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 AC106820.3-201ENST00000561653 397 ntBASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 RPSAP52-203ENST00000622976 1023 ntBASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 AP001002.3-201ENST00000623482 206 ntBASIC13.28□□□□□ -0.28
HIST3H2AQ7L7L0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms