Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 AC098614.1-201ENST00000368528 745 ntBASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 AC124283.3-201ENST00000570869 594 ntBASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 AC007614.4-201ENST00000564048 1827 ntBASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 AC113367.3-201ENST00000508316 1912 ntBASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 AC007787.1-201ENST00000588095 1583 ntBASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM53Q6P2H8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 AC011495.1-201ENST00000498085 584 ntBASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 WASH4P-201ENST00000564273 1246 ntBASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 CTBP2P3-201ENST00000585629 1255 ntBASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 CU634019.7-201ENST00000624153 1185 ntBASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 FP236241.2-201ENST00000624906 1185 ntBASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 AL033527.5-201ENST00000641382 801 ntBASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 ZBED1P1-201ENST00000502364 1930 ntBASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.4□□□□□ -0.26
TMEM53Q6P2H8 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
TMEM53Q6P2H8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
TMEM53Q6P2H8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.4□□□□□ -0.27
TMEM53Q6P2H8 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TMEM53Q6P2H8 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
TMEM53Q6P2H8 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 AC093525.8-201ENST00000624099 1342 ntBASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
TMEM53Q6P2H8 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms